Contig 004740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004D05Sequence461004740 (6)ref|XP_009609806.1|2e-23PREDICTED: ethylene-responsive transcription factor 4 [Nicotiana tomentosiformi613004740 (6)ref|XP_009772525.1|3e-26PREDICTED: ethylene-responsive transcription factor 4 [Nicotiana sylvestris] sp
JMFN032K05Sequence623004740 (6)dbj|BAJ72664.1|3e-43ethylene response factor 3 [Nicotiana benthamiana]
JMFN036A19Sequence620004740 (6)dbj|BAJ72664.1|3e-44ethylene response factor 3 [Nicotiana benthamiana]
JMFN038B21Sequence629004740 (6)dbj|BAJ72664.1|5e-43ethylene response factor 3 [Nicotiana benthamiana]
JMFS130F08Sequence621004740 (6)dbj|BAJ72664.1|3e-44ethylene response factor 3 [Nicotiana benthamiana]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF004D05- G
                      ____________________________________________________________
consensus G
 
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rJMFF004D05- AATAACGAGTTACAGTTCAGTAGGAACAGCAAGAGGAATTGTAAGCAATTCGCTCGTCGG
                      ____________________________________________________________
consensus AATAACGAGTTACAGTTCAGTAGGAACAGCAAGAGGAATTGTAAGCAATTCGCTCGTCGG
 
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rJMFF004D05- CTGTAAAAAAACACGACAGTTCACTCGAATTCTATGTACAAAAACAAGCAATTAGTGATC
                      ____________________________________________________________
consensus CTGTAAAAAAACACGACAGTTCACTCGAATTCTATGTACAAAAACAAGCAATTAGTGATC
 
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rJMFF004D05- TCATTCTAGTAATCATTGATTAAGATTAATCAAGCTTCTGTGGGTGGAGCAAGGTTAAGA
                      ____________________________________________________________
consensus TCATTCTAGTAATCATTGATTAAGATTAATCAAGCTTCTGTGGGTGGAGCAAGGTTAAGA
 
. : . : . : . : . : . :
rJMFF004D05- TCAAGGTTAAGGCGTTTCTCTGCAACGCCGGCGCCGGCGCCGACAAAGTGGTTCTCTTCG
JMFN032K05+ G
                      ____________________________________________________________
consensus TCAAGGTTAAGGCGTTTCTCTGCAACGCCGGCGCCGGCGCCGACAAAGTGGTTCTCTTCG
 
. : . : . : . : . : . :
rJMFF004D05- ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFN032K05+ ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAA-GATTCGCCGGCTCG
JMFN036A19+ AAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFS130F08+ AAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFN038B21+ TTGGAAGGATTCGCCGGCTCG
                      ____________________________________________________________
consensus ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
 
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rJMFF004D05- AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN032K05+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN036A19+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFS130F08+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN038B21+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
                      ____________________________________________________________
consensus AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
 
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rJMFF004D05- ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN032K05+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN036A19+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFS130F08+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN038B21+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
                      ____________________________________________________________
consensus ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
 
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rJMFF004D05- TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFN032K05+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFN036A19+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFS130F08+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFF004D05+ TAGTATTCANGGATCTAACGCCGGCGGCNTCGCCGGAACCAAGGNGGCGC
JMFN038B21+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
                      ____________________________________________________________
consensus TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
 
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rJMFF004D05- GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN032K05+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN036A19+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFS130F08+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFF004D05+ GTGAGATCCAGCTCCAGTGGGANNTGNGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN038B21+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
                      ____________________________________________________________
consensus GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
 
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rJMFF004D05- TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN032K05+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN036A19+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFS130F08+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFF004D05+ TCCACCGTGCTGCTNTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN038B21+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
                      ____________________________________________________________
consensus TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
 
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rJMFF004D05- GCCTTANCCCCA
JMFN032K05+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFN036A19+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFS130F08+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFF004D05+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFN038B21+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
                      ____________________________________________________________
consensus GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
 
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JMFN032K05+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFN036A19+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFS130F08+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFF004D05+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFN038B21+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
                      ____________________________________________________________
consensus GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
 
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JMFN032K05+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFN036A19+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFS130F08+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFF004D05+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFN038B21+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
                      ____________________________________________________________
consensus TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
 
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JMFN032K05+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFN036A19+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFS130F08+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFF004D05+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFN038B21+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
                      ____________________________________________________________
consensus TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
 
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JMFN032K05+ TACTCAAGAAACTCAGAAAGGAC
JMFN036A19+ TACTCAAGAAACTCAGAAAGGACGAATAA
JMFS130F08+ TACTCAAGAAACTCAGAAAGGACGAATAA
JMFF004D05+ TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAG
JMFN038B21+ TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAGTGATGAGGAAGAA
                      ____________________________________________________________
consensus TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAGTGATGAGGAAGAA