Contig 004728:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034B03Sequence482004728 (5)ref|XP_011075483.1|1e-94PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED554004728 (5)ref|XP_011075483.1|4e-73PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFN031D19Sequence577004728 (5)ref|XP_011075483.1|8e-122PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFN038E21Sequence552004728 (5)ref|XP_011075483.1|8e-122PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED
JMFS134D11Sequence615004728 (5)ref|XP_011075483.1|5e-121PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED

Alignment

This contig is upended


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rJMFF034B03- TATTGCTACCACACAAGATTTAGAAAGAAAAAAAGAAAAATGC
                      ____________________________________________________________
consensus TATTGCTACCACACAAGATTTAGAAAGAAAAAAAGAAAAATGC
 
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rJMFF034B03- ATCTTGAAAATATCTTGCAAAATGAACCTTAACTATATCCCTCAAGAGAAACTGCAAAAT
                      ____________________________________________________________
consensus ATCTTGAAAATATCTTGCAAAATGAACCTTAACTATATCCCTCAAGAGAAACTGCAAAAT
 
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rJMFF034B03- TGCAGTCAAAGTTTTTCCAGTACAGGCATAGAAGCCTAGACAGAAATTGCGCTCACTCTT
                      ____________________________________________________________
consensus TGCAGTCAAAGTTTTTCCAGTACAGGCATAGAAGCCTAGACAGAAATTGCGCTCACTCTT
 
. : . : . : . : . : . :
rJMFF034B03- CATCTTCTTCGTCTCCATCACCACCCGCTGCCTTCTTAGCTGCAGCCTTCTGGTTCTTTC
JMFS134D11+ TCCATCACCACCCGCTGCCTTTTTAGCTGCAGCCTTCTGGTTCTTTC
JMFN031D19+ GCAGCCTTCTGGTTCTTTC
                      ____________________________________________________________
consensus CATCTTCTTCGTCTCCATCACCACCCGCTGCCTTTTTAGCTGCAGCCTTCTGGTTCTTTC
 
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rJMFF034B03- GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFN038E21+ TCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFS134D11+ GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFN031D19+ GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
                      ____________________________________________________________
consensus GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
 
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rJMFF034B03- TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFN038E21+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFS134D11+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFF034B03+ TCTTCCAACCCTGA
JMFN031D19+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
                      ____________________________________________________________
consensus TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
 
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rJMFF034B03- TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFN038E21+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFS134D11+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFF034B03+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFN031D19+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
                      ____________________________________________________________
consensus TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
 
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rJMFF034B03- ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFN038E21+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFS134D11+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFF034B03+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFN031D19+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
                      ____________________________________________________________
consensus ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
 
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rJMFF034B03- CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFN038E21+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFS134D11+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFF034B03+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFN031D19+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
                      ____________________________________________________________
consensus CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
 
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rJMFF034B03- CACCCTCAAAAATACGGCGTGGATCCTTCTC
JMFN038E21+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFS134D11+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFF034B03+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFN031D19+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
                      ____________________________________________________________
consensus CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
 
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JMFN038E21+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFS134D11+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFF034B03+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFN031D19+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
                      ____________________________________________________________
consensus TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
 
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JMFN038E21+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFS134D11+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFF034B03+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFN031D19+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
                      ____________________________________________________________
consensus ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
 
. : . : . : . : . : . :
JMFN038E21+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFS134D11+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFF034B03+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFN031D19+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTTCACCTGCCGCG
                      ____________________________________________________________
consensus TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTTCACCTGCCGCG