Contig 004727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005O17Sequence494004727 (12)ref|XP_009758373.1|8e-86PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]752004727 (12)ref|XP_009758373.1|3e-85PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFF010L06Sequence543004727 (12)ref|XP_009758373.1|3e-93PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]750004727 (12)ref|XP_009758373.1|3e-92PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFF019L22Sequence545004727 (12)ref|XP_009758373.1|3e-93PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]731004727 (12)ref|XP_009758373.1|3e-92PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFF048L13Sequence339004727 (12)
JMFN011F12Sequence613004727 (12)ref|XP_009758373.1|4e-93PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFN011I23Sequence472004727 (12)ref|XP_006477274.1|4e-65PREDICTED: probable calcium-binding protein CML13-like [Citrus sinensis] gb|KDO
JMFN018E03Sequence640004727 (12)ref|XP_009758373.1|9e-93PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFN028L11Sequence685004727 (12)ref|XP_009758373.1|2e-92PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]
JMFN030B18Sequence610004727 (12)ref|XP_009758373.1|7e-93PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF048L13-                                 GTACAAGCTGGTTGCTGACAGTAAAAATTGATGGGAA
rJMFF005O17-                                                                     A
                      ____________________________________________________________
consensus                                    GTACAAGCTGGTTGCTGACAGTAAAAATTGATGGGAA
 
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rJMFF048L13-          CTATACACATGTTATAGTGAATGAATCTCACGAACATGATTCCAAAGATTGAAAGGTTCA
rJMFF005O17-          CTATACACATGTTATAGTGAATGAATCTCAAGTACATGATTCCAAAGATTGAAAGGTTCA
JMFN028L11+                                                                 GGTTCA
rJMFF019L22-                    GTTATAGTGAATGAATCTCAAGTACATGATTCCAAAGATTGAAAGGTTCA
rJMFF010L06-                    GTTATAGTGAATGAATCTCAAGTACATGATTCCAAAGATTGAAAGGTTCA
                      ____________________________________________________________
consensus             CTATACACATGTTATAGTGAATGAATCTCAAGTACATGATTCCAAAGATTGAAAGGTTCA
 
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rJMFF048L13-          GACTACTGAAATCCAAATACAAAAGCCCTGAAACAGCCAAAACACGCAAATTGTTAGATA
rJMFF005O17-          GACTACTGAAATCCAAATACACAACCCCTGAAACATCCAAAACCCGCAAATTGTTCAATA
JMFN028L11+           GACTACTGAAATCCAAATACACAACCCCTGAAACATCCAAAACCCGCAAATTGTTCAATA
rJMFF019L22-          GACTACTGAAATCCAAATACACAACCCCTGAAACATCCAAAACCCGCAAATTGTTCAATA
JMFN018E03+                                               CCAAAACCCGCAAATTGTTCAATA
rJMFF010L06-          GACTACTGAAATCCAAATACACAACCCCTGAAACATCCAAAACCCGCAAATTGTTCAATA
                      ____________________________________________________________
consensus             GACTACTGAAATCCAAATACACAACCCCTGAAACATCCAAAACCCGCAAATTGTTCAATA
 
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rJMFF048L13-          ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
rJMFF005O17-          ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
JMFN028L11+           ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
rJMFF019L22-          ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
JMFN018E03+           ACAAACAATTCAGAAACGAAAATAACCATCAAGGCAGAGATTTAGANAATGCCCTTCAAA
JMFN011F12+                               AATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
rJMFF010L06-          ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
JMFN030B18+                                                           ATGCCCTTCAAA
                      ____________________________________________________________
consensus             ACAAACAAATCAGAAACGAAAATAAACATCAAGGCAGAGATTTAGAAAATGCCCTTCAAA
 
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rJMFF048L13-          CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
rJMFF005O17-          CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
JMFN028L11+           CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
rJMFF019L22-          CGCGCCATGCAAAAGACTAACCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
JMFN018E03+           CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
JMFN011F12+           CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
rJMFF010L06-          CGCGCCATGCAAAAGACTAACCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
JMFN030B18+           CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
                      ____________________________________________________________
consensus             CGCGCCATGCAAAAGACTAGCCTGTAGAAGGAAGCAAACTAGGAACTCCGCTTCATTCAA
 
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rJMFF048L13-          GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
rJMFF005O17-          GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFN028L11+           GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
rJMFF019L22-          GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFN018E03+           GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFN011F12+           GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFN011I23+                                                 TGGCAACCATGCGAGCGATGAA
rJMFF010L06-          GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFF019L22+                              GTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFF010L06+                                TGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
JMFN030B18+           GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
                      ____________________________________________________________
consensus             GGTACAACCAATAACTAATGTTGCAGGAGGAAATCATTTGGCAACCATGCGAGCGATGAA
 
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rJMFF048L13-          GT                                                          
rJMFF005O17-          GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFN028L11+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
rJMFF019L22-          GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFN018E03+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFN011F12+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFN011I23+           GTCCTCATAGCGGATCTAGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
rJMFF010L06-          GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFF019L22+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFF010L06+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFF005O17+                CATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
JMFN030B18+           GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
                      ____________________________________________________________
consensus             GTCCTCATAGCGGATCTTGCCGTCGGATCCACAATCAACCTCGCGGATCCACTCATCAAA
 
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rJMFF005O17-          CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFN028L11+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
rJMFF019L22-          CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFN018E03+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFN011F12+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFN011I23+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
rJMFF010L06-          CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFF019L22+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFF010L06+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFF005O17+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
JMFN030B18+           CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
                      ____________________________________________________________
consensus             CTCCGCAGGCTCGAGCTTCTCCCCGATGCTGGTGAGGATGTGCTTGAGATCCGCAACGAC
 
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rJMFF005O17-          AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFN028L11+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
rJMFF019L22-          AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFN018E03+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFN011F12+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFN011I23+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
rJMFF010L06-          AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFF019L22+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFF010L06+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFF005O17+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
JMFN030B18+           AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
                      ____________________________________________________________
consensus             AACGAAGCCCGAGTTGTCCTTATCGAGGACCTTAAAGGCGTCGCGGAGCTGGCGATCGAA
 
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rJMFF005O17-          GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFN028L11+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
rJMFF019L22-          GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFN018E03+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFN011F12+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFN011I23+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGAGACGGCG
rJMFF010L06-          GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFF019L22+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFF010L06+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFF005O17+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
JMFN030B18+           GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
                      ____________________________________________________________
consensus             GGGCTCGGGCTTGAGGTGCTTGGACATGAGGTCGAGGAAGCGCTTGAAATCGA-ACGGCG
 
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rJMFF005O17-          AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFN028L11+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
rJMFF019L22-          AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFN018E03+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFN011F12+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFN011I23+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
rJMFF010L06-          AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFF019L22+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFF010L06+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFF005O17+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
JMFN030B18+           AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
                      ____________________________________________________________
consensus             AGCTGAGCTTCTCCTCGGAGATGATGGATTTGAGCTGCGCCTGGGTCGGGTTACCACCGA
 
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rJMFF005O17-          GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFN028L11+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
rJMFF019L22-          GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFN018E03+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFN011F12+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFN011I23+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
rJMFF010L06-          GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFF019L22+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFF010L06+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFF005O17+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
JMFN030B18+           GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
                      ____________________________________________________________
consensus             GTGACCTCATGAGGATGCCGAGCTCGGACGGCGCGATCTTCCCGTCGCCGTCGGTGTCGA
 
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rJMFF005O17-          ACAACGTGAATGCCTCCTTCATGGGAGGATATTTGATCGCTGCTCAAATCTTTCCCCATT
JMFN028L11+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
rJMFF019L22-          ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFN018E03+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFN011F12+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFN011I23+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
rJMFF010L06-          ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFF019L22+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFF010L06+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFF005O17+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
JMFN030B18+           ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
                      ____________________________________________________________
consensus             ACAACGTGAATGCCTCCTTCAT-GGAGGATATTTGATCGCTGCTCAGATCTTTCCCCATT
 
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rJMFF005O17-          TCTCCCTCTCCCTTTCTCTCTCTG                                    
JMFN028L11+           TCTCCCTCTCCCTTTC                                            
rJMFF019L22-          TCTCCCTCTCCCTTTCTCTCTCT                                     
JMFN018E03+           TCTCCCTCTCCCTTTCTC                                          
JMFN011F12+           TCTCCCTCTCCCTTTCTCTCTCTGTCTTTCTCTGA                         
JMFN011I23+           TCTCCCTCTCCCTTTCTCTCTCTGTCTTTCT                             
rJMFF010L06-          TCTCCCTCTCCCTTTCTCTCTCTGTCTTTCTCTGAGCTTT                    
JMFF019L22+           TC                                                          
JMFF010L06+           TC                                                          
JMFF005O17+           TC                                                          
JMFN030B18+           TCTCCCTCTCCCTTTCTCTCTCTGTCTTTCTCTGAGCTTTAGAGAAAAGAAAAGCTTCGG
                      ____________________________________________________________
consensus             TCTCCCTCTCCCTTTCTCTCTCTGTCTTTCTCTGAGCTTTAGAGAAAAGAAAAGCTTCGG