Contig 004716:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051P11Sequence631009253 (5)ref|XP_004231043.1|1e-85PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum]594004716 (4)ref|XP_007026646.1|2e-21Metallopeptidase M24 family protein isoform 1 [Theobroma cacao] gb|EOY07148.1| M
JMFN016G13Sequence624004716 (4)ref|XP_007026646.1|4e-20Metallopeptidase M24 family protein isoform 1 [Theobroma cacao] gb|EOY07148.1| M
JMSF046L10Sequence759002464 (3)ref|XP_009599303.1|1e-118PREDICTED: proliferation-associated protein 2G4-like isoform X1 [Nicotiana tome786004716 (4)emb|CDP09213.1|8e-84unnamed protein product [Coffea canephora]
JMSF049N08Sequence606002464 (3)ref|XP_009599303.1|4e-78PREDICTED: proliferation-associated protein 2G4-like isoform X1 [Nicotiana tome737004716 (4)emb|CDP09213.1|2e-73unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF046L10+                               CTGGTGATGGCAAGCCAAAACTCTTGGATGAGAAACNAA
                      ____________________________________________________________
consensus                                  CTGGTGATGGCAAGCCAAAACTCTTGGATGAGAAACNAA
 
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rJMSF049N08+                  TATAAGAGAGCTGTGGATAAAAGCTACAATTTGAAGATGAAAGCATCTAGAT
rJMSF046L10+          CAACAATCTATAAGAGAGCTGTGGATAAAAGCTACAATTTGAAGATGAAAGCATCTAGAT
                      ____________________________________________________________
consensus             CAACAATCTATAAGAGAGCTGTGGATAAAAGCTACAATTTGAAGATGAAAGCATCTAGAT
 
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rJMSF049N08+          TCATCTTTAGTGAGATCAGCCAGAAGTTCCCAATCATGCCATTTACGGCAAGGGATTTGG
rJMSF046L10+          TCATCTTTAGTGAGATCAGCCAGAAGTTCCCAATCATGCCATTTACGGCAAGGGATTTGG
                      ____________________________________________________________
consensus             TCATCTTTAGTGAGATCAGCCAGAAGTTCCCAATCATGCCATTTACGGCAAGGGATTTGG
 
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rJMSF049N08+          AAGAGAAGAGGGCGCGTCTCGGACTGGTTGAATGTGTCAACCATGATCTTTTACAGCCAT
rJMSF046L10+          AAGAGAAGAGGGCGCGTCTCGGACTGGTTGAATGTGTCAACCATGATCTTTTACAGCCAT
                      ____________________________________________________________
consensus             AAGAGAAGAGGGCGCGTCTCGGACTGGTTGAATGTGTCAACCATGATCTTTTACAGCCAT
 
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rJMSF049N08+          ATCCTGTTCTGCATGAAAAGCCTGGTGATTTGGTTGCTCACATAAAATTCACTGTTCTAT
rJMSF046L10+          ATCCTGTTCTGCATGAAAAGCCTGGTGATTTGGTTGCTCACATAAAATTCACTGTTCTAT
JMFN016G13-                                               CTCACATAAAATTCACTGTTCTAT
                      ____________________________________________________________
consensus             ATCCTGTTCTGCATGAAAAGCCTGGTGATTTGGTTGCTCACATAAAATTCACTGTTCTAT
 
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rJMSF049N08+          TGATGCCCAATGGATCTGATAGGGTTACATCGCATCCACTCCAGGAGCTTCAGGCTACTA
rJMSF046L10+          TGATGCCCAATGGATCTGATAGGGTTACATCGCATCCACTCCAGGAGCTTCAGGCTACTA
JMFN016G13-           TGATGCCCAATGGATCTGATAGGGTTACATCGCATCCACTCCAGGAGCTTCAGGCTACTA
                      ____________________________________________________________
consensus             TGATGCCCAATGGATCTGATAGGGTTACATCGCATCCACTCCAGGAGCTTCAGGCTACTA
 
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rJMSF049N08+          AGACAATAGACAATGAACCTGAGATTAAGGCTTGGCTAGCCCTTCCAACAAAGACAAAGA
rJMSF046L10+          AGACAATAGACAATGAACCTGAGATTAAGGCTTGGCTAGCCCTTCCAACAAAGACAAAGA
rJMFF051P11+                              GAGATTAAGGCTTGGCTAGCCCTTCCAACAAAGACAAAGA
JMFN016G13-           AGACAATAGACAATGAACCTGAGATTAAGGCTTGGCTAGCCCTTCCAACAAAGACAAAGA
                      ____________________________________________________________
consensus             AGACAATAGACAATGAACCTGAGATTAAGGCTTGGCTAGCCCTTCCAACAAAGACAAAGA
 
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rJMSF049N08+          AGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGGGAGAAGGCTGAGGAGTCAAGCC
rJMSF046L10+          AGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGGGAGAAGGCTGAGGAGTCAAGCC
rJMFF051P11+          AGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGGGAGAAGGCTGAGGAGTCAAGCC
JMFN016G13-           AGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGGGAGAAGGCTGAGGAGTCAAGCC
                      ____________________________________________________________
consensus             AGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGGGAGAAGGCTGAGGAGTCAAGCC
 
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rJMSF049N08+          AGACTGAGGCAATGGAGGAAGATGCAAATGGTGCCAAGTCGTAGTGAACTTGTTCGTTTA
rJMSF046L10+          AGACTGAGGCAATGGAGGAAGATGCAAATGGTGCCAAGTCGTAGTGAACTTGTTCGTTTA
rJMFF051P11+          AGACTGAGGCAATGGAGGAAGATGCAAATGGTGCCAAGTCGTAGTGAACTTGTTCGTTTA
JMFN016G13-           AGACTGAGGCAATGGAGGAAGATGCAAATGGTGCCAAGTCGTAGTGAACTTGTTCGTTTA
                      ____________________________________________________________
consensus             AGACTGAGGCAATGGAGGAAGATGCAAATGGTGCCAAGTCGTAGTGAACTTGTTCGTTTA
 
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rJMSF049N08+          ATGTTGGTTTGGTAATCTCTTTGGAAGAGTGTGTTGAGGTTCCCTGATCAGCGATGCTTA
rJMSF046L10+          ATGTTGGTTTGGTAATCTCTTTGGAAGAGTGTGTTGAGGTTCCCTGATCAGCGATGCTTA
rJMFF051P11+          ATGTTGGTTTGGTAATCTCTTTGGAAGAGTGTGTTGAGGTTCCCTGATCAGCGATGCTTA
JMFN016G13-           ATGTTGGTTTGGTAATCTCTTTGGAAGAGTGTGTTGAGGTTCCCTGATCAGCGATGCTTA
                      ____________________________________________________________
consensus             ATGTTGGTTTGGTAATCTCTTTGGAAGAGTGTGTTGAGGTTCCCTGATCAGCGATGCTTA
 
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rJMSF049N08+          AACGATGAGCTGATTGTGCTTCCTTTGCATATGTGGGATGGATGCTTGTCATCGTTACAA
rJMSF046L10+          AACGATGAGCTGATTGTGCTTCCTTTGCATATGTGGGATGGATGCTTGTCATCGTTACAA
rJMFF051P11+          AACGATGAGCTGATTGTGCTTCCTTTGCATATGTGGGATGGATGCTTGTCATCGTTACAA
JMFN016G13-           AACGATGAGCTGATTGTGCTTCCTTTGCATATGTGGGATGGATGCTTGTCATCGTTACAA
                      ____________________________________________________________
consensus             AACGATGAGCTGATTGTGCTTCCTTTGCATATGTGGGATGGATGCTTGTCATCGTTACAA
 
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rJMSF049N08+          ATACACTTTGGAACGTTTCATTGTTCTGTGGTTTAACTGCA                   
rJMSF046L10+          ATACACTTTGGAACGTTTCATTGTTCTGTGGTTTAACTGCAATGCTTTTAAG        
rJMFF051P11+          ATACACTTTGGAACGTTTCATTGTTCTGTGGTTTAACTGCAATGCTTTTAAG        
JMFN016G13-           ATACACTTTGGAACGTTTCATTGTTCTGTGGTTTAACTGCAATGCTTTTAAGACCTTAGC
                      ____________________________________________________________
consensus             ATACACTTTGGAACGTTTCATTGTTCTGTGGTTTAACTGCAATGCTTTTAAGACCTTAGC
 
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JMFN016G13-           TCGCGGGGAACAGTAAAAGAAAGAGCAGTATGGAGAAGATAAAGAACAGTGAGAAGAACA
                      ____________________________________________________________
consensus             TCGCGGGGAACAGTAAAAGAAAGAGCAGTATGGAGAAGATAAAGAACAGTGAGAAGAACA
 
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JMFN016G13-           ATTTTATTGTCTTGTAATCTCTAACTTCTGTACATGAATACAATAATATATAGAGTACAA
                      ____________________________________________________________
consensus             ATTTTATTGTCTTGTAATCTCTAACTTCTGTACATGAATACAATAATATATAGAGTACAA
 
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JMFN016G13-           ATGTAACCTTCTCATTAAGTACAAAAACTGTTTCAGCTGTTACAAATAATCATAATAATG
                      ____________________________________________________________
consensus             ATGTAACCTTCTCATTAAGTACAAAAACTGTTTCAGCTGTTACAAATAATCATAATAATG