Contig 004708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN012B14Sequence577004708 (3)ref|XP_009803252.1|2e-19PREDICTED: hexokinase-1 [Nicotiana sylvestris] gb|AAS60192.1| hexokinase 1a [Nic
JMSF036G24Sequence629007980 (2)gb|AAS60194.1|9e-74hexokinase 3 [Nicotiana tabacum]244004708 (3)
JMSF048P03Sequence667007980 (2)gb|AAS60194.1|2e-94hexokinase 3 [Nicotiana tabacum]434004708 (3)

Alignment

This contig is upended


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JMFN012B14-                                  GGGAAGGGACACGGCAAGAAGTGGTGGGTCCTCGAAG
                      ____________________________________________________________
consensus                                    GGGAAGGGACACGGCAAGAAGTGGTGGGTCCTCGAAG
 
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JMFN012B14-           ACGGTGATAGCTATGGACGGTGGATTGTACGAGCACTACACGGAATACCGGAAGTGCTTG
                      ____________________________________________________________
consensus             ACGGTGATAGCTATGGACGGTGGATTGTACGAGCACTACACGGAATACCGGAAGTGCTTG
 
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JMFN012B14-           GAGAATAGTTTGAACGAACTGGTTGGCGAGGAAATGGCGGCCCACATTGTGTTCGAGCAC
                      ____________________________________________________________
consensus             GAGAATAGTTTGAACGAACTGGTTGGCGAGGAAATGGCGGCCCACATTGTGTTCGAGCAC
 
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JMFN012B14-           TCGGTTGATGGTTCGGGCATTGGAGCTGCTCTTCTTGCAGCCTCACACTCGCTCTATCTC
                      ____________________________________________________________
consensus             TCGGTTGATGGTTCGGGCATTGGAGCTGCTCTTCTTGCAGCCTCACACTCGCTCTATCTC
 
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rJMSF048P03+                AAGTCCTAANAAGGGCCGTNGAAANTAAAAAAAAAAAAACCTTGTTTGCTAGAC
rJMSF036G24+                                         TAAAAAAAAAAAAACCTTGTTTGCTAGAC
JMFN012B14-           GAAGATAAGTCCTAATAAGTGCCGTCGAAACTAAAAAAAAAAAAACCTTGTTTGCTAGAC
                      ____________________________________________________________
consensus             GAAGATAAGTCCTAATAAGTGCCGTCGAAACTAAAAAAAAAAAAACCTTGTTTGCTAGAC
 
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rJMSF048P03+          ACTGGTTTCAGTTTTGGTCTGATTCTTATCTCGCCTTTTTGCCTCCGACCAATTCTCTGC
rJMSF036G24+          ACTGGTTTCAGTTTTGGTCTGATTCTTATCTCGCCTTTTTGCCTCCGACCAATTCTCTGC
JMFN012B14-           ACTGGTTTCAGTTTTGGTCTGATTCTTATCTCGCCTTTTTGCCTCCGACCAATTCTCTGC
                      ____________________________________________________________
consensus             ACTGGTTTCAGTTTTGGTCTGATTCTTATCTCGCCTTTTTGCCTCCGACCAATTCTCTGC
 
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rJMSF048P03+          AAAAGTTGCTCTTATGTTGAGTAGTAGTTTAGGAGATTGCGGCATGGCGGATTTTGCCGT
rJMSF036G24+          AAAAGTTGCTCTTATGTTGAGTAGTAGTTTAGGAGATTGCGGCATGGCGGATTTTGCCGT
JMFN012B14-           AAAAGTTGCTCTTATGTTGAGTAGTAGTTTAGGAGATTGCGGCATGGCGGATTTTGCCGT
                      ____________________________________________________________
consensus             AAAAGTTGCTCTTATGTTGAGTAGTAGTTTAGGAGATTGCGGCATGGCGGATTTTGCCGT
 
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rJMSF048P03+          ACAACATTCATTCGGGATGGATAATTATTCTGAGGATATCATTTGTCATAATGGATTGCC
rJMSF036G24+          ACAACATTCATTCGGGATGGATAATTATTCTGAGGATATCATTTGTCATAATGGATTGCC
JMFN012B14-           ACAACATTCATTCGGGATGGATAATTATTCTGAGGATATCATTTGTCATAATGGATTGCC
                      ____________________________________________________________
consensus             ACAACATTCATTCGGGATGGATAATTATTCTGAGGATATCATTTGTCATAATGGATTGCC
 
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rJMSF048P03+          AGTTCTGCCCCATAACTGAGCCAATTAGGGGTAATAAAATTGAGAATTGAGTTGTTGATC
rJMSF036G24+          AGTTCTGCCCCATAACTGAGC                                       
JMFN012B14-           AGTTCTGCCCCATAACTGAGCCAATTAGGGGTAATAAAATTGAGAATTGAGTTGTTGATC
                      ____________________________________________________________
consensus             AGTTCTGCCCCATAACTGAGCCAATTAGGGGTAATAAAATTGAGAATTGAGTTGTTGATC
 
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rJMSF048P03+          TCTCATCTCTCAACTGT                                           
JMFN012B14-           TCTCATCTCTCAACTGTTGGCTACTGCCCTTTTGCTTCATATTTTATATATTTTCAGCAT
                      ____________________________________________________________
consensus             TCTCATCTCTCAACTGTTGGCTACTGCCCTTTTGCTTCATATTTTATATATTTTCAGCAT