Contig 004667:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D02Sequence176004667 (12)713004095 (11)ref|XP_010548093.1|4e-108PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [
JMFF014C11Sequence201004667 (12)685004095 (11)ref|XP_010548093.1|2e-108PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [
JMFF029A17Sequence491004667 (12)gb|EYU22457.1|4e-49hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]653004095 (11)gb|ADV02785.1|4e-89pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas]
JMFF029I14Sequence359004667 (12)gb|EYU22457.1|4e-19hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]693004095 (11)ref|XP_010548093.1|2e-110PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [
JMFF035D04Sequence387004667 (12)gb|EYU22457.1|1e-25hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]690004095 (11)ref|XP_010548093.1|2e-110PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [
JMFF041C17Sequence462004667 (12)ref|XP_010255436.1|1e-42PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-lik557004095 (11)gb|ADV02785.1|2e-59pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas]
JMFF041N15Sequence642004667 (12)gb|EYU22457.1|7e-86hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]633004095 (11)gb|ADV02785.1|3e-75pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas]
JMFF044E17Sequence621004667 (12)gb|EYU22457.1|2e-80hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]615004095 (11)gb|ADV02785.1|9e-72pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas]
JMFF048N12Sequence501004667 (12)gb|EYU22457.1|1e-47hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]438004095 (11)gb|ADV02785.1|1e-43pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas]
JMFN044E05Sequence624004667 (12)gb|EYU22457.1|5e-92hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]
JMFS122C02Sequence561004667 (12)gb|EYU22457.1|6e-74hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata]
JMSF051K18Sequence682004667 (12)sp|P52903.1|ODPA_SOLTU8e-99RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial;719004095 (11)ref|XP_010548093.1|3e-109PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [

Alignment

This contig is upended


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JMFN044E05+                                                        TTCTGAGCAAAGGCC
JMSF051K18+                       AAGGCAAAAGTGACATAATCCTCTTTGGAGTATTTCTGAGCAAAGGCC
                      ____________________________________________________________
consensus                         AAGGCAAAAGTGACATAATCCTCTTTGGAGTATTTCTGAGCAAAGGCC
 
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JMFN044E05+           AAGCCAATACCTAGAGGAACCTGAGCCCCAACTATCCCATGTCCCCCGTAGAATCCACTA
JMSF051K18+           AAGCCAATACCTAGAGGAACCTGAGCCCCAACTATCCCATGTCCCCCGTAGAATCCACTA
JMFS122C02+                                                                    CTA
JMFF044E17+                                            ATCCCATGTCCCCCGTAGAATCCACTA
JMFF041N15+                       AGAGGAACCTGAGCCCCAACTATCCCATGTCCNCCGTAGAATCCACTA
                      ____________________________________________________________
consensus             AAGCCAATACCTAGAGGAACCTGAGCCCCAACTATCCCATGTCCCCCGTAGAATCCACTA
 
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JMFN044E05+           TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
JMSF051K18+           TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
JMFS122C02+           TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
JMFF044E17+           TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
JMFF041N15+           TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
                      ____________________________________________________________
consensus             TCCTTCTTGTAAAAGTGCATCGAGCCTCCTTTCCCCTTAGAGCACCCGCCTTTTCTCCCC
 
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JMFN044E05+           ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
JMSF051K18+           ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
JMFS122C02+           ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
JMFF029A17+                                                    GAGGTAGATGCAGTGGTCT
JMFF041C17+                                                            TGCAGTGGTCT
JMFF044E17+           ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
JMFF041N15+           ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
JMFF048N12+                                              GCGGGCGAGGTAGATGCAGTGGTCT
                      ____________________________________________________________
consensus             ATGAGCTCCGCGAACGCCTCGAACAGCGTTCCCCCGCGGGCGAGGTAGATGCAGTGGTCT
 
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JMFN044E05+           CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMSF051K18+           CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMFS122C02+           CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMFF029A17+           CGGTAGNCNGNGANGANGCAGTCNTTNTTGGTAATCGCGGATTCCATGCNGACGCAGACG
JMFF041C17+           CGGTAGCCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMFF044E17+           CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMFF041N15+           CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
JMFF048N12+           CGGTAGGCCGTGATGATGCAGTCTTTC-TGGTAATCGCGGATTCCATGCCGACGCAGACG
                      ____________________________________________________________
consensus             CGGTAGGCCGTGATGATGCAGTCCTTCTTGGTAATCGCGGATTCCATGCCGACGCAGACG
 
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JMFN044E05+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMSF051K18+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFS122C02+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF029A17+           GCCTCCTGGCCGTNGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF041C17+           GCCTTCTGACCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF044E17+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF041N15+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF035D04+                                          CGCGGATGAGTTTGGCCTTGTAGAGCGAG
JMFF029I14+                                                                    GAG
JMFF048N12+           GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
                      ____________________________________________________________
consensus             GCCTCCTGGCCGTCGTACAGGTGGCAGAAGCCGCGGATGAGTTTGGCCTTGTAGAGCGAG
 
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JMFN044E05+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMSF051K18+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFS122C02+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFF029A17+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFF041C17+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFF044E17+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFF041N15+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
JMFF035D04+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTNNGAAGANCCCCATCAGCTCC
JMFF029I14+           TCGGAGGCGATCTCCATTCGCNGCATCAGCNCCATATCTNCGAAGAACCCCATCAGCTCC
JMFF048N12+           TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
                      ____________________________________________________________
consensus             TCGGAGGCGATCTCCATTCGCCGCATCAGCGCCATATCTCTGAAGAACCCCATCAGCTCC
 
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JMFN044E05+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMSF051K18+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFS122C02+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF029A17+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF041C17+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGGCGCGCTGAAGGGGAG
JMFF044E17+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF041N15+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF035D04+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF029I14+           TTGGGGNTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
JMFF048N12+           TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
                      ____________________________________________________________
consensus             TTGGGGCTGGTCTCGACGGAGCGCGAAGGAGGATCGATCCTGTGG-GCGCTGAAGGGGAG
 
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JMFN044E05+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMSF051K18+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFS122C02+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF029A17+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF041C17+           GTTTGTCTCCACTGTGATGACGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF044E17+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF041N15+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF035D04+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTANGACGA
JMFF014C11+                          GATGGCGGCGGAGGAGTCCNCTGAGAGATGGCGGATGTACGACGA
JMFF029I14+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
JMFF048N12+           GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
                      ____________________________________________________________
consensus             GTTTGTCTCCACTGTGATGGCGGCGGAGGAGTCCACTGAGAGATGGCGGATGTACGACGA
 
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JMFN044E05+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMSF051K18+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFS122C02+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF029A17+           CGCCGCCGACCAGCCGG-TTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF041C17+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF044E17+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF041N15+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF035D04+           CGCCGCCGACCAGCCGG-TTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF014C11+           CGCCGCCGACCAGCCGGGTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF005D02+                         CGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF029I14+           CGCCGCCGACCAGCCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
JMFF048N12+           CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
                      ____________________________________________________________
consensus             CGCCGCCGAC--AGCGGCTTCAGGAGAATACCACTTCGACTCGCCGACAAAGCCATTTCT
 
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JMFN044E05+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCG       
JMSF051K18+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFS122C02+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF029A17+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF041C17+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF044E17+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF041N15+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF035D04+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF014C11+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF005D02+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF029I14+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
JMFF048N12+           GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
                      ____________________________________________________________
consensus             GGTCGGAATATTGGATTCCGGCGAGTTTCAGATCTAAGAGGACTGAATCTGCGTCCAAGT
 
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JMSF051K18+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGG                          
JMFS122C02+           TTACGGGTTTGGTTCAATAGT                                       
JMFF029A17+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAAT      
JMFF041C17+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCG                           
JMFF044E17+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAAT      
JMFF041N15+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTC   
JMFF035D04+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTC   
JMFF014C11+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCT                        
JMFF005D02+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTC   
JMFF029I14+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTC   
JMFF048N12+           TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTCCTA
                      ____________________________________________________________
consensus             TTACGGGTTTGGTTCAATAGTGAGAGAGAGTCGGCTAAGTGTTATCCAACCAATTTCCTA