| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011I06 | Sequence | 790 | 004647 (11) | emb|CBI22349.3| | 7e-161 | unnamed protein product [Vitis vinifera] | 920 | 008315 (10) | ref|XP_009114489.1| | 6e-137 | PREDICTED: polyubiquitin-like [Brassica rapa] |
| JMFF020M18 | Sequence | 772 | 004647 (11) | ref|XP_003619702.1| | 2e-123 | Ubiquitin-like protein [Medicago truncatula] | 910 | 008315 (10) | gb|ABH08753.1| | 6e-130 | ubiquitin [Arabidopsis thaliana] |
| JMFF022E04 | Sequence | 763 | 004647 (11) | ref|XP_003619702.1| | 2e-129 | Ubiquitin-like protein [Medicago truncatula] | |||||
| JMFF023O07 | Sequence | 671 | 004647 (11) | ref|XP_007205619.1| | 2e-92 | hypothetical protein PRUPE_ppa009116mg [Prunus persica] gb|EMJ06818.1| hypotheti | |||||
| JMFF024A09 | Sequence | 765 | 004647 (11) | emb|CBI22349.3| | 5e-124 | unnamed protein product [Vitis vinifera] | 679 | 008315 (10) | ref|NP_001190681.1| | 4e-71 | ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [ |
| JMFF035M14 | Sequence | 776 | 004647 (11) | emb|CBI22349.3| | 8e-129 | unnamed protein product [Vitis vinifera] | 851 | 008315 (10) | gb|AAF04147.1| | 1e-115 | ubiquitin precursor [Hevea brasiliensis] |
| JMFF042O14 | Sequence | 652 | 004647 (11) | ref|XP_003619702.1| | 1e-130 | Ubiquitin-like protein [Medicago truncatula] | 579 | 008315 (10) | emb|CAC84144.1| | 1e-63 | polyubiquitin-like protein [Nicotiana tabacum] |
| JMFF045C12 | Sequence | 614 | 004647 (11) | ref|XP_003619702.1| | 1e-119 | Ubiquitin-like protein [Medicago truncatula] | 604 | 008315 (10) | ref|NP_001190681.1| | 6e-91 | ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [ |
| JMFF051B10 | Sequence | 571 | 004647 (11) | ref|XP_003619702.1| | 2e-109 | Ubiquitin-like protein [Medicago truncatula] | 513 | 008315 (10) | emb|CAC84144.1| | 3e-57 | polyubiquitin-like protein [Nicotiana tabacum] |
| JMFS147D04 | Sequence | 606 | 004647 (11) | ref|XP_003619702.1| | 6e-124 | Ubiquitin-like protein [Medicago truncatula] | |||||
| JMSF040E04 | Sequence | 619 | 004647 (11) | ref|XP_003619702.1| | 1e-110 | Ubiquitin-like protein [Medicago truncatula] | 1047 | 008315 (10) | emb|CAA48140.1| | 1e-172 | ubiquitin [Antirrhinum majus] |
This contig is upended
. : . : . : . : . : . :
JMFF011I06+ TTTTCACAAAG
____________________________________________________________
consensus TTTTCACAAAG
. : . : . : . : . : . :
JMFF020M18+ GACTCCTTTNGGATATTG
JMFF011I06+ ATNTGCATCCCCCCNCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATNG
____________________________________________________________
consensus ATNTGCATCCCCCCNCGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTG
. : . : . : . : . : . :
JMFF020M18+ TAGTCTGCAAGAGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGA
JMFF011I06+ TAGTCTGCAAGAGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGA
____________________________________________________________
consensus TAGTCTGCAAGAGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGA
. : . : . : . : . : . :
JMFF020M18+ TCTGGAGGAATTCCTTCCNTTATCTGGAATCTTAGCCTTTACATNGTCAATGGTATCTGA
JMFF035M14+ TGAATCTTAGCCTTTACATTGTCAATGGTATCTGA
JMFF042O14+ GGAATTCCTTCC-TTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGA
JMFF024A09+ TTATCTGGAATCTTAGCCTTTCCATNGTCAATGGTATNTGA
JMFS147D04+ TAGCCTTTACATTGTCAATGGTATCTGA
JMSF040E04+ ACATTGTCAATGGTATCTGA
JMFF022E04+ GGAATTCCTTCC-TTATCTGGAATCTTAGCCTTTACATTGTCAATGGTATCTGA
JMFF011I06+ TCTGGAGGAATTCCTTCC-TTATCTTGAATCTTAGCCTTTACATNGTCAATGGTATCTGA
JMFF045C12+ TCAATGGTATCTGA
____________________________________________________________
consensus TCTGGAGGAATTCCTTCC-TTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGA
. : . : . : . : . : . :
JMFF020M18+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF035M14+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF042O14+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF024A09+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFS147D04+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMSF040E04+ GCTCTCAACCTCAAGCGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATNTGCATACC
JMFF022E04+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF051B10+ GCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF011I06+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
JMFF045C12+ GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
____________________________________________________________
consensus GCTCTCAACCTCAAGTGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACC
. : . : . : . : . : . :
JMFF020M18+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFF035M14+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFF042O14+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFF024A09+ NCCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFS147D04+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMSF040E04+ ACCACGCNGNCGAAGGACANGGTGGAGGGTAGACTCCTTCNGGATATTGTAGTNTGCAAG
JMFF022E04+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFF051B10+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATNGTAGTCTGCAAG
JMFF023O07+ CCTTCTGGATATTGTAGTCTGCAAG
JMFF011I06+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
JMFF045C12+ ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
____________________________________________________________
consensus ACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAG
. : . : . : . : . : . :
JMFF020M18+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF035M14+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF042O14+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF024A09+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFS147D04+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMSF040E04+ AGTGCGTCCATCATCNAGNTGCTTTCCAGCAAAAATCAGTCTNTGTTGATCTGGAGGAAT
JMFF022E04+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF051B10+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF023O07+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF011I06+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
JMFF045C12+ AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
____________________________________________________________
consensus AGTGCGTCCATCATCAAGCTGCTTTCCAGCAAAAATCAGTCTCTGTTGATCTGGAGGAAT
. : . : . : . : . : . :
JMFF020M18+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF035M14+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF042O14+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF024A09+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFS147D04+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMSF040E04+ TCCTTCCTTATCTNGAATCTTAGCCTNTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF022E04+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF051B10+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF023O07+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF011I06+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
JMFF045C12+ TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
____________________________________________________________
consensus TCCTTCCTTATCTTGAATCTTAGCCTTTACATTGTCAATGGTATCTGAGCTCTCAACCTC
. : . : . : . : . : . :
JMFF020M18+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF035M14+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF042O14+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF024A09+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFS147D04+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMSF040E04+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF022E04+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF051B10+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF023O07+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF011I06+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
JMFF045C12+ AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
____________________________________________________________
consensus AAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACAAAGATCTGCATACCACCACGCAGACG
. : . : . : . : . : . :
JMFF020M18+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF035M14+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF042O14+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF024A09+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFS147D04+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMSF040E04+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF022E04+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF051B10+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF023O07+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF011I06+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
JMFF045C12+ AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
____________________________________________________________
consensus AAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTATAGTCTGCAAGTGTACGGCCATC
. : . : . : . : . : . :
JMFF020M18+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF035M14+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF042O14+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF024A09+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFS147D04+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMSF040E04+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCNGGAGGAATTCCTTCCTTATC
JMFF022E04+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF051B10+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF023O07+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF011I06+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
JMFF045C12+ TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
____________________________________________________________
consensus TTCAAGCTGCTTTCCTGCAAAAATCAGTCGCTGTTGATCTGGAGGAATTCCTTCCTTATC
. : . : . : . : . : . :
JMFF020M18+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF035M14+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF042O14+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF024A09+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFS147D04+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMSF040E04+ TNGGATNTTTGCCTNAACATTATCAATGGTATNGGAACTCTCAACCTCAAGAGTAATAGT
JMFF022E04+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF051B10+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF023O07+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF011I06+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
JMFF045C12+ TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
____________________________________________________________
consensus TTGGATTTTTGCCTTAACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATAGT
. : . : . : . : . : . :
JMFF020M18+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF035M14+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF042O14+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF024A09+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFS147D04+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMSF040E04+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF022E04+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF051B10+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF023O07+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF011I06+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
JMFF045C12+ CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
____________________________________________________________
consensus CTTTCCAGTAAGAGTCTTTACAAAGATCTGCATCTTGAGAGAGGCTTTAGGTGTCGAGCG
. : . : . : . : . : . :
JMFF020M18+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF035M14+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF042O14+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF024A09+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFS147D04+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGAT
JMSF040E04+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGA
JMFF022E04+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF051B10+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF023O07+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF011I06+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGAC
JMFF045C12+ ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGACAAT
____________________________________________________________
consensus ATGGAGGGATATGGAGAGAGAGATTTGTCGCGATTGATTGATTTGAAGAAACAGGACAAT