| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002I06 | Sequence | 516 | 004625 (13) | ref|XP_004229630.1| | 7e-30 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 722 | 012433 (17) | ref|XP_010491045.1| | 1e-160 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMFF041M10 | Sequence | 624 | 004625 (13) | ref|NP_001275292.1| | 5e-40 | cellulose synthase [Solanum tuberosum] gb|AAP97495.1| cellulose synthase [Solanu | 542 | 012433 (17) | ref|XP_010278977.1| | 5e-21 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Nelumbo |
| JMFF044N05 | Sequence | 611 | 004625 (13) | ref|XP_004229630.1| | 5e-40 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 567 | 012433 (17) | ref|XP_009799381.1| | 5e-22 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Nicotiana sy |
| JMFF047N12 | Sequence | 621 | 004625 (13) | ref|XP_004229630.1| | 2e-39 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 488 | 012433 (17) | ref|XP_010278977.1| | 3e-10 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Nelumbo |
| JMFS037E10 | Sequence | 477 | 004625 (13) | ref|XP_004229630.1| | 4e-24 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | |||||
| JMFS159H08 | Sequence | 425 | 004625 (13) | ref|XP_004229630.1| | 4e-10 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | |||||
| JMSF005C01 | Sequence | 353 | 004625 (13) | ||||||||
| JMSF019C15 | Sequence | 460 | 004625 (13) | ref|XP_004229630.1| | 1e-13 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 495 | 012433 (17) | ref|XP_010491045.1| | 3e-109 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF020F22 | Sequence | 623 | 004625 (13) | ref|XP_004229630.1| | 5e-44 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 438 | 012433 (17) | gb|AAZ79659.1| | 7e-94 | putative cellulose synthase [Fagus sylvatica] |
| JMSF022G04 | Sequence | 640 | 004625 (13) | ref|XP_004229630.1| | 4e-46 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 764 | 012433 (17) | ref|XP_007052526.1| | 2e-155 | Cellulose synthase family protein isoform 2 [Theobroma cacao] ref|XP_007052530.1 |
| JMSF034N16 | Sequence | 635 | 004625 (13) | ref|XP_004229630.1| | 2e-45 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 727 | 012433 (17) | ref|XP_010491045.1| | 7e-148 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF041C04 | Sequence | 629 | 004625 (13) | ref|XP_004229630.1| | 7e-44 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 706 | 012433 (17) | ref|XP_010491045.1| | 3e-147 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF041F11 | Sequence | 679 | 004625 (13) | ref|XP_004229630.1| | 4e-51 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 105 | 012433 (17) | ref|XP_006582808.1| | 1e-06 | PREDICTED: LOW QUALITY PROTEIN: probable cellulose synthase A catalytic subunit |
This contig is upended
. : . : . : . : . : . :
JMSF034N16+ TCATTATTTTCAGAAGAGTAACGAAGACCATTG
JMSF020F22+ TTTTCAGAAGAGTAACGAAGACCATTG
JMSF041C04+ TCATTATTTTCAGAAGAGTAACGAAGACCATTG
JMSF022G04+ TCTGCTTCTCATTATTTTCAGAAGAGTAACGAAGACCATTG
JMFF047N12+ CAGAAGAGTAACGAAGACCATGN
JMFF044N05+ ACGAAGACCATGN
JMFF041M10+ TTCAGAAGAGTAACGAAGACCATTG
____________________________________________________________
consensus TCTGCTTCTCATTATTTTCAGAAGAGTAACGAAGACCATTG
. : . : . : . : . : . :
JMSF034N16+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAATTGCAGGACTTCCTTTA
JMSF041F11+ ATTGCAGGACTTCCTTTA
JMSF020F22+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAATTGCAGGACTTCCTTTA
JMSF041C04+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAATTGCAGGACTTCCTTTA
JMSF022G04+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAATTGCAGGACTTCCTTTA
JMFF047N12+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAA-TGCAGGACTTCCTTTA
JMFF044N05+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAA-TGCAGGACTTCCTTTA
JMFF041M10+ GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAA-TGCAGGACTTCCTTTA
____________________________________________________________
consensus GTATCATCATGAGCATCAACATCCTCCACTTCTTCATTATGAATTGCAGGACTTCCTTTA
. : . : . : . : . : . :
JMSF034N16+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMSF041F11+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMFS037E10+ GATTCCCATCCTTCGTTTCATAT
JMSF020F22+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMSF041C04+ TGTCTNTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMSF022G04+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMFF047N12+ TGTCTCTGGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMFF044N05+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMFF002I06+ ATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
JMFF041M10+ TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
____________________________________________________________
consensus TGTCTCTTGTATCTAGTTTTGCATTGGGGACATGACTGATTCCCATCCTTCCTTTCATAT
. : . : . : . : . : . :
JMSF034N16+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMSF041F11+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMFS037E10+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAGCAAATTGCTCACCA
JMFS159H08+ CAGACATGGCAAGCAACAAATTGCTCACCA
JMSF020F22+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMSF041C04+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMSF022G04+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMFF047N12+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMFF044N05+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMFF002I06+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMSF019C15+ CAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
JMFF041M10+ TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
____________________________________________________________
consensus TCATAGCATGGCCTGCACACAGGAAAGGCACAGACATGGCAAGCAACAAATTGCTCACCA
. : . : . : . : . : . :
JMSF034N16+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMSF041F11+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFS037E10+ TCCACAGTTGTACCAACACCATCGCCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFS159H08+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMSF020F22+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMSF041C04+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACNTGATCACTGGTCTTTAAG
JMSF022G04+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFF047N12+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFF044N05+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFF002I06+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMSF019C15+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
JMFF041M10+ TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
____________________________________________________________
consensus TCCACAGTTGTACCAACACCATCACCACAAATCTGGCAGACCTGATCACTGGTCTTTAAG
. : . : . : . : . : . :
JMSF034N16+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF041F11+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFS037E10+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFS159H08+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF020F22+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF041C04+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF022G04+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFF047N12+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFF044N05+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFF002I06+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF019C15+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMSF005C01+ CCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
JMFF041M10+ GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
____________________________________________________________
consensus GATTTCCCCTTGGTATCAGCTTCAGAATCCATTGTCACGTTGTCTTGAGTCATAAAATGG
. : . : . : . : . : . :
JMSF034N16+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMSF041F11+ AACTGNTATGTGGAGTATCAACNTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFS037E10+ AACTGCTATGTGGAGTATCAACGTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFS159H08+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMSF020F22+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMSF041C04+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMSF022G04+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFF047N12+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFF044N05+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFF002I06+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMSF019C15+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGATACAGACCATCAAGGCCCACACT
JMSF005C01+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
JMFF041M10+ AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
____________________________________________________________
consensus AACTGCTATGTGGAGTATCAACCTTACTTGGATGTGCTACAGACCATCAAGGCCCACACT
. : . : . : . : . : . :
JMSF034N16+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF041F11+ CTTGAAAACAGAATCTTTCCTCTCAGTNTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFS037E10+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFS159H08+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF020F22+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF041C04+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF022G04+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFF047N12+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFF044N05+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFF002I06+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF019C15+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMSF005C01+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
JMFF041M10+ CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
____________________________________________________________
consensus CTTGAAAACAGAATCTTTCCTCTCAGTCTTCCACTCGAGGTCCGAGCGGTTATCCCAAAC
. : . : . : . : . : . :
JMSF034N16+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF041F11+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFS037E10+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFS159H08+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF020F22+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF041C04+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF022G04+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFF047N12+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFF044N05+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFF002I06+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF019C15+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMSF005C01+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
JMFF041M10+ CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
____________________________________________________________
consensus CCTTCACAAAAATTATTCTCGACCCAGCTCAACTCTCCACCAAATCTTCCTTCAAATCCT
. : . : . : . : . : . :
JMSF034N16+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF041F11+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFS037E10+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFS159H08+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF020F22+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF041C04+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF022G04+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFF047N12+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFF044N05+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFF002I06+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF019C15+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMSF005C01+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
JMFF041M10+ TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
____________________________________________________________
consensus TCAATTCAGTACATAAACCCACAAGATTGAACGCAATGCAGCACAAAAATCAACTCCAGC
. : . : . : . : . : . :
JMSF034N16+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCT
JMSF041F11+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTC
JMFS037E10+ AAGAAGCAATAGATGAAATGTCACCCACAACTTC
JMFS159H08+ AAGAACCAATAGATGAAATGTCACCCACAACTTCT
JMSF020F22+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCT
JMSF041C04+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACT
JMSF022G04+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATC
JMFF047N12+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATCT
JMFF044N05+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATCT
JMFF002I06+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATC
JMSF019C15+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATC
JMSF005C01+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATC
JMFF041M10+ AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATCTA
____________________________________________________________
consensus AAGAAGCAATAGATGAAATGTCACCCACAACTTCTCACTGTCTTTCACTATCTCTATCTA