Contig 004616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015E17Sequence528004616 (18)ref|XP_010260063.1|3e-58PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFF024M18Sequence497004616 (18)emb|CDO99820.1|6e-54unnamed protein product [Coffea canephora]656004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFF030H21Sequence526004616 (18)emb|CDO99820.1|2e-57unnamed protein product [Coffea canephora]657004616 (18)emb|CDO99820.1|8e-57unnamed protein product [Coffea canephora]
JMFF039O13Sequence101004616 (18)508004616 (18)ref|XP_010260063.1|3e-58PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFF040P02Sequence155004616 (18)138004616 (18)
JMFN025P17Sequence640004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFN035G13Sequence627004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFN038D21Sequence521004616 (18)emb|CDO99820.1|2e-52unnamed protein product [Coffea canephora]
JMFN042D10Sequence625004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]
JMFN043B09Sequence566004616 (18)ref|XP_010260063.1|5e-58PREDICTED: histone H2B-like [Nelumbo nucifera]
JMSF028J17Sequence655004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]621004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]
JMSF052H18Sequence673004616 (18)ref|XP_010260063.1|2e-57PREDICTED: histone H2B-like [Nelumbo nucifera]622004616 (18)ref|XP_010260063.1|1e-57PREDICTED: histone H2B-like [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF040P02+ TTTTTTTTTTGAGAA
JMFN042D10+ TGAGAA
JMFN043B09+ AGAA
JMFN025P17+ TGAGAA
JMSF028J17+ A
                      ____________________________________________________________
consensus TTTTTTTTTTGAGAA
 
. : . : . : . : . : . :
JMFF040P02+ TGCTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
JMFN042D10+ TGCTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
rJMFF039O13- AGATAACAGTACCGTATAATCCGAAATTAAA
rJMFF040P02- CTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
JMFN043B09+ TGCTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
JMFN025P17+ TGCTGATCGATTGATGNATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
rJMFF024M18- TGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
JMFN035G13+ GATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
JMSF028J17+ TGCTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
rJMSF028J17- GTATAATCCGAAATTAAA
rJMFF030H21- TGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
rJMSF052H18- AGTACCGTATAATCCGAAATTAAA
                      ____________________________________________________________
consensus TGCTGATCGATTGATTGATAGTCGATGGTAGATAACAGTACCGTATAATCCGAAATTAAA
 
. : . : . : . : . : . :
JMFF040P02+ CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
JMFN042D10+ CCCAAATCAAAGCTACTTGACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMFF039O13- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMFF040P02- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
JMFN043B09+ CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
JMFN025P17+ CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMFF024M18- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
JMFN035G13+ CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
JMSF028J17+ CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMSF028J17- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMFF030H21- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
rJMSF052H18- CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
                      ____________________________________________________________
consensus CCCAAATCAAAGCTACTTTACAGCTATTAACCCTAATAGTTCGGATTATATCAAAAGAAA
 
. : . : . : . : . : . :
JMFF040P02+ ACACAGATTTTAGATTTCAT
JMFN042D10+ ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
rJMFF039O13- ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
rJMFF040P02- ACACAGATTTTAGATTTCAT
JMFN043B09+ ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFN025P17+ ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
rJMFF024M18- ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFN035G13+ ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMSF028J17+ ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFN038D21+ CTTGGTGCCTTCA
rJMSF028J17- ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFF030H21+ TCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
rJMFF030H21- ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFF015E17+ TTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMFF024M18+ TGACTGCTTTGGTGCCTTCA
rJMSF052H18- ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
JMSF052H18+ AATTTGGTGACTGCTTTGGTGCCTTCA
                      ____________________________________________________________
consensus ACACAGATTTTAGATTTCATCTAAGAACTTGTAAATTTGGTGACTGCTTTGGTGCCTTCA
 
. : . : . : . : . : . :
JMFN042D10+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
rJMFF039O13- GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFN043B09+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFN025P17+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
rJMFF024M18- GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFN035G13+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMSF028J17+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFN038D21+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
rJMSF028J17- GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFF030H21+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
rJMFF030H21- GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFF015E17+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMFF024M18+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
rJMSF052H18- GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
JMSF052H18+ GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
                      ____________________________________________________________
consensus GAGACGGCGTGCTTTGCCAATTCGCCGGGAAGAACCAATCTCACGGCGGTCTGGATCTCA
 
. : . : . : . : . : . :
JMFN042D10+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
rJMFF039O13- CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFN043B09+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFN025P17+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
rJMFF024M18- CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFN035G13+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMSF028J17+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFN038D21+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
rJMSF028J17- CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFF030H21+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
rJMFF030H21- CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFF015E17+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMFF024M18+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
rJMSF052H18- CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
JMSF052H18+ CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
                      ____________________________________________________________
consensus CGGGAAGTGATGGTCGGCTTCTTGTTGTAGCGGGCCAAGCGAGATGCCTCTTGGGCGAGC
 
. : . : . : . : . : . :
JMFN042D10+ TTTTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
rJMFF039O13- TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFN043B09+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFN025P17+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
rJMFF024M18- TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFN035G13+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMSF028J17+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFN038D21+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
rJMSF028J17- TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFF030H21+ TTCTCGAAGATATCATTGATGAAGCTGTCCATGATGCCCATGGCCTTGCTGGAGATCCCA
rJMFF030H21- TTCTCGAAGATATCATTGATGAAGCTGTCCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFF015E17+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMFF024M18+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
rJMSF052H18- TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
JMSF052H18+ TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
                      ____________________________________________________________
consensus TTCTCGAAGATATCATTGATGAAGCTGTTCATGATGCCCATGGCCTTGCTGGAGATCCCA
 
. : . : . : . : . : . :
JMFN042D10+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
rJMFF039O13- ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFN043B09+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFN025P17+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
rJMFF024M18- ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFN035G13+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMSF028J17+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFN038D21+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
rJMSF028J17- ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFF030H21+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
rJMFF030H21- ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFF015E17+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMFF024M18+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
rJMSF052H18- ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
JMSF052H18+ ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
                      ____________________________________________________________
consensus ATATCAGGATGAACTTGCTTCAGCACCTTGAAGATGTAGATCTTGTAGGTCTCCGACGAC
 
. : . : . : . : . : . :
JMFN042D10+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
rJMFF039O13- TTCTTCACCCTCTTCTTCTTCTTATCTCCGGNCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFN043B09+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFN025P17+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
rJMFF024M18- TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFN035G13+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMSF028J17+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFN038D21+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
rJMSF028J17- TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFF030H21+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
rJMFF030H21- TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFF015E17+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMFF024M18+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
rJMSF052H18- TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
JMSF052H18+ TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
                      ____________________________________________________________
consensus TTCTTCACCCTCTTCTTCTTCTTATCTCCGGCCGCCGCAGCTCCACCCTCCTTAGGGAGC
 
. : . : . : . : . : . :
JMFN042D10+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
rJMFF039O13- TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCC
JMFN043B09+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFN025P17+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
rJMFF024M18- TTCTTCCCGGCCTTGGGCTTCTTGTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFN035G13+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMSF028J17+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFN038D21+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
rJMSF028J17- TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFF030H21+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
rJMFF030H21- TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFF015E17+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMFF024M18+ TTCTTCCCGGCCTTGGGCTTCTTGTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
rJMSF052H18- TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
JMSF052H18+ TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
                      ____________________________________________________________
consensus TTCTTCCCGGCCTTGGGCTTCTTCTCCGCCGGAGCTTTCTCTGCCGGAACTTTCTCCGCC
 
. : . : . : . : . : . :
JMFN042D10+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFN043B09+ GCCGGCTTCTTCTCTGCCTTCG
JMFN025P17+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
rJMFF024M18- GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFN035G13+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMSF028J17+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFN038D21+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
rJMSF028J17- GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFF030H21+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
rJMFF030H21- GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFF015E17+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFF024M18+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
rJMSF052H18- GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMSF052H18+ GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
JMFF039O13+ TCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
                      ____________________________________________________________
consensus GCCGGCTTCTTCTCTGCCTTCGGTGCCATCTACGCTAGAGAGAGAACACAAAAATATTTC
 
. : . : . : . : . : . :
JMFN042D10+ TGGAAGAGGAAGGATTGC
JMFN025P17+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTT
rJMFF024M18- TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTG
JMFN035G13+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAAT
JMSF028J17+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTAC
JMFN038D21+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAA
rJMSF028J17- TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTAC
JMFF030H21+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAG
rJMFF030H21- TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAG
JMFF015E17+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGT
JMFF024M18+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGT
rJMSF052H18- TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGT
JMSF052H18+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGT
JMFF039O13+ TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGTGAT
                      ____________________________________________________________
consensus TGGAAGAGGAAGGATTGCTTTAGGTGAAGGGCTTTTTGCTAATTGAAAGGTACAGGTGAT