Contig 004608:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037P03Sequence519004608 (5)gb|EYU46177.1|3e-32hypothetical protein MIMGU_mgv1a016559mg [Erythranthe guttata]266004608 (5)ref|XP_011080455.1|59.7PREDICTED: uncharacterized protein LOC105163710 [Sesamum indicum]
JMSF006O16Sequence244004608 (5)gb|EYU46177.1|5e-08hypothetical protein MIMGU_mgv1a016559mg [Erythranthe guttata]116018124
JMSF023P22Sequence586004608 (5)gb|EYU46177.1|2e-33hypothetical protein MIMGU_mgv1a016559mg [Erythranthe guttata]533004608 (5)ref|XP_009760352.1|112PREDICTED: uncharacterized protein LOC104212703 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023P22+ TTTTTTTTTTGCAGACCTTTTTTTT
                      ____________________________________________________________
consensus TTTTTTTTTTGCAGACCTTTTTTTT
 
. : . : . : . : . : . :
rJMSF023P22- GATAGCCTAGTACAGCTATG
JMSF023P22+ TTTACTAATAGTAAAAGATAAAACAGTAAAGTTTACATGTGATAGCCTAGTACAGCTATG
                      ____________________________________________________________
consensus TTTACTAATAGTAAAAGATAAAACAGTAAAGTTTACATGTGATAGCCTAGTACAGCTATG
 
. : . : . : . : . : . :
rJMSF023P22- ATATGAAAGAGTAAAACAGCANGAGAATGAATAAAANGGATTGAAGAGCACACAAACAAA
JMSF023P22+ ATATGAAAGAGTAAAACAGCAAGAGAATGAATAAAAAGGATTGAAGAGCACACAAACAAA
                      ____________________________________________________________
consensus ATATGAAAGAGTAAAACAGCAAGAGAATGAATAAAAAGGATTGAAGAGCACACAAACAAA
 
. : . : . : . : . : . :
rJMSF023P22- TAGCTTCCGGAATTCTCGTCCCTAACANGGGAAAACAGNGTCTAAAACCATATCANGATT
rJMFF037P03- TTCCGGAATTCTCGNCCCTAACANGGGAAAACAGNGTCTAAAACCATATCANGATT
JMSF023P22+ TAGCTTCCGGAATTCTCGTCCCTAACAAGGGAAAACAGTGTCTAAAACCATATCATGATT
JMFF037P03+ CTAACAAGGGAAAACAGTGTCTAAAACCATATCATGATT
                      ____________________________________________________________
consensus TAGCTTCCGGAATTCTCGTCCCTAACAAGGGAAAACAGTGTCTAAAACCATATCATGATT
 
. : . : . : . : . : . :
rJMSF023P22- TTAGAAAGCTATGAGCAGCATCNGAACTCAGTTCTTCATAAACAAGTTTCANGTAAACTT
rJMFF037P03- TTAAAAAGNTATGANCAGCNTCTGAACTCANTTNTTCNTAAACAAGTTTCNTGNAAANTT
JMSF023P22+ TTAGAAAGCTATGAGCAGCATCTGAACTCAGTTCTTCATAAACAAGTTTCATGTAAACTT
JMFF037P03+ TTAGAAAGCTATGAGCAGCATCTGAACTCAGTTCTTCATAAACAAGTTTCATGTAAACTT
                      ____________________________________________________________
consensus TTAGAAAGCTATGAGCAGCATCTGAACTCAGTTCTTCATAAACAAGTTTCATGTAAACTT
 
. : . : . : . : . : . :
rJMSF023P22- GCTGAAANGCCTTGCAAAACTTTTCNGCTTCCGCTGNGCCAACCTTTTGCTCTACAACNG
rJMFF037P03- GCTGAAANGCCTTGCAAAANTTTTCNGCTTCCGCTGNGCCAACCTTTTGCTCTGCAACNG
JMSF023P22+ GCTGAAATGCCTTGCAAAACTTTTCTGCTTCCGCTGTGCCAACCTTTTGCTCTACAACTG
JMFF037P03+ GCTGAAATGCCTTGCAAAACTTTTCTGCTTCCGCTGTGCCAACCTTTTGCTCTGCAACTG
                      ____________________________________________________________
consensus GCTGAAATGCCTTGCAAAACTTTTCTGCTTCCGCTGTGCCAACCTTTTGCTCTGCAACTG
 
. : . : . : . : . : . :
rJMSF023P22- CCTTCAGTTTGTTCCAAAANGCATCAGGGTAGTCAATTTCCCGAGTCTTANAACTACCTC
rJMFF037P03- CCTTCAGTTTGTTCCAAAA
JMSF023P22+ CCTTCAGTTTGTTCCAAAATGCATCATGGTAGTCAATTTCCCGAGTCTTAGAACTACCTC
JMSF006O16+ GCATCATGGTAGTCAATTTCCCGAGTCTTAGAACTACCTC
JMFF037P03+ CCTTCAGTTTGTTCCAAAATGCATCATGGTAGTCAATTTCCCGAGTCTTAGAACTACCTC
                      ____________________________________________________________
consensus CCTTCAGTTTGTTCCAAAATGCATCATGGTAGTCAATTTCCCGAGTCTTAGAACTACCTC
 
. : . : . : . : . : . :
rJMSF023P22- CATCAGCTCCATTCCCCTCATTGAGTAATTTCCTTCCCTCCAAATTTCGCACCGACNGAN
JMSF023P22+ CATCAGCTCCATTCCCCTCATTGAGTAATTTCCTTCCCTCCAAATTTCGCACCGACTGAG
JMSF006O16+ CATCAGCTCCATTCCCCTCATTGAGTAATTTCCTTCCCTCCAAATTTCGCACCGACTGAG
JMFF037P03+ CATCAGCTCCATTCCCCTCATTGAGTAATTTCCTTCCCTCCAAATTTCGCACCGACTGAG
                      ____________________________________________________________
consensus CATCAGCTCCATTCCCCTCATTGAGTAATTTCCTTCCCTCCAAATTTCGCACCGACTGAG
 
. : . : . : . : . : . :
rJMSF023P22- AAGCTGANGGCCTCGTCTCAAATTCANGGNGAAAATCGCGAGATCTGACGACCGGGAANA
JMSF023P22+ AAGCTGATGGCCTCGTCTCAGATTCAAGGTGAAAATCGCGAGATCTGACGACCGGGAAGA
JMSF006O16+ AAGCTGATGGCCTCGTCTCAGATTCAAGGTGAAAATCGCGAGATCTGACGACCGGGAAGA
JMFF037P03+ AAGCTGATGGCCTCGTCTCAGATTCAAGGTGAAAATCGCGAGATCTGACGACCGGGAAGA
                      ____________________________________________________________
consensus AAGCTGATGGCCTCGTCTCAGATTCAAGGTGAAAATCGCGAGATCTGACGACCGGGAAGA
 
. : . : . : . : . : . :
rJMSF023P22- GCTCAAGAAAACGTCGGAATT-CAAGCTCATCCANGGCCNAACTCCNGCCTTCTCCGAGT
JMSF023P22+ GCTCAAGAAAACGTCGGAATT-CAAGCTCATCCATGGCCGAACTCCTGCCTTCTCCGAGT
JMSF006O16+ GCTCAAGAAAACGTCGGAATT-CAAGCTCATCCATGGCCGAACTCCTGCCTTCTCCGAGT
JMFF037P03+ GCTCAAGAAAACGTCGGAATTCCAAGCTCATCCATGGCCGAACTCCTGCCTTCTCCGAGT
                      ____________________________________________________________
consensus GCTCAAGAAAACGTCGGAATT-CAAGCTCATCCATGGCCGAACTCCTGCCTTCTCCGAGT
 
. : . : . : . : . : . :
rJMSF023P22- TGAACGCTCGAATTTCAACTC
JMSF023P22+ TGAACGCTCGAATTTCAACTC
JMSF006O16+ TGAACGCTCGAATTTCAACTC
JMFF037P03+ TGAACGCTCGAATTTCAACTCAATAGTCCTTGTCCTTTCAAATTGTTTTCTTCTTTAGAG
                      ____________________________________________________________
consensus TGAACGCTCGAATTTCAACTCAATAGTCCTTGTCCTTTCAAATTGTTTTCTTCTTTAGAG
 
. : . : . : . : . : . :
JMFF037P03+ TATTTTTTTTGTCTTCAATGGGTGATGAAAATTTTTAACTTTTAGGCCCTTAATAATTAT
                      ____________________________________________________________
consensus TATTTTTTTTGTCTTCAATGGGTGATGAAAATTTTTAACTTTTAGGCCCTTAATAATTAT