Contig 004587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O14Sequence467004587 (2)ref|XP_007211275.1|1e-57hypothetical protein PRUPE_ppa003360mg [Prunus persica] gb|EMJ12474.1| hypotheti690002511 (2)ref|XP_009773749.1|8e-52PREDICTED: protein NRT1/ PTR FAMILY 4.6 isoform X2 [Nicotiana sylvestris]
JMFF033D09Sequence535004587 (2)ref|XP_007211275.1|1e-57hypothetical protein PRUPE_ppa003360mg [Prunus persica] gb|EMJ12474.1| hypotheti746002511 (2)ref|XP_009773749.1|2e-73PREDICTED: protein NRT1/ PTR FAMILY 4.6 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF004O14+                  TCCTCCAACACCAAGTGCCACCAGATAGAGGCCAGCAAATAACATTGCTGACT
JMFF033D09+                ATTCCTCCAACACCAAGTGCCACCAGATAGAGGCCAGCAAATAACATTGCTGACT
                      ____________________________________________________________
consensus                  ATTCCTCCAACACCAAGTGCCACCAGATAGAGGCCAGCAAATAACATTGCTGACT
 
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JMFF004O14+           TCCAACCTTTGACTTCATGACAAGGGGCGTTTCTGTTAGGTGATGAACAAACTGATGGTT
JMFF033D09+           TCCAACCTTTGACTTCATGACAAGGGGCGTTTCTGTTAGGTGATGAACAAACTGATGGTT
                      ____________________________________________________________
consensus             TCCAACCTTTGACTTCATGACAAGGGGCGTTTCTGTTAGGTGATGAACAAACTGATGGTT
 
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JMFF004O14+           TCAGAGAAGGTATCTGTGCTTGAACTGTGAGCATCAACAGACCCAAAAATTCAATTGTTG
JMFF033D09+           TCAGAGAAGGTATCTGTGCTTGAACTGTGAGCATCAACAGACCCAAAAATTCAATTGTTG
                      ____________________________________________________________
consensus             TCAGAGAAGGTATCTGTGCTTGAACTGTGAGCATCAACAGACCCAAAAATTCAATTGTTG
 
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JMFF004O14+           CACTTATTAGAAAGATGGAGTAGGTGGTGAAGAGGGCATCAGACAAAAACCCACCAAGGA
JMFF033D09+           CACTTATTAGAAAGATGGAGTAGGTGGTGAAGAGGGCATCAGACAAAAACCCACCAAGGA
                      ____________________________________________________________
consensus             CACTTATTAGAAAGATGGAGTAGGTGGTGAAGAGGGCATCAGACAAAAACCCACCAAGGA
 
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JMFF004O14+           GAGCAAGGAAGAACGATGTGCCCATAAAGTTAGTGACAATGTTGGCTGAAGTAGATGGAG
JMFF033D09+           GAGCAAGGAAGAACGATGTGCCCATAAAGTTAGTGACAATGTTGGCTGAAGTAGATGGAG
                      ____________________________________________________________
consensus             GAGCAAGGAAGAACGATGTGCCCATAAAGTTAGTGACAATGTTGGCTGAAGTAGATGGAG
 
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JMFF004O14+           AGAAATGCATGAATTTTGAGAGGTAAAGCACGAGGTTGCTTGCATTCGCCAGGTATGCTA
JMFF033D09+           AGAAATGCATGAATTTTGAGAGGTAAAGCACGAGGTTGCTTGCATTCGCCAGGTATGCTA
                      ____________________________________________________________
consensus             AGAAATGCATGAATTTTGAGAGGTAAAGCACGAGGTTGCTTGCATTCGCCAGGTATGCTA
 
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JMFF004O14+           GGTTCTCCACTATCTCTACAACCAAGACAAAAGATACAGCAAGAACACCACCATGGCGGC
JMFF033D09+           GGTTCTCCACTATCTCTACAACCAAGACAAAAGATACAGCAAGAACACCACCATGGCGGC
                      ____________________________________________________________
consensus             GGTTCTCCACTATCTCTACAACCAAGACAAAAGATACAGCAAGAACACCACCATGGCGGC
 
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JMFF004O14+           CCTTCAAGGCTGGTCTATTTCTCCAGTCTACATACCCTTCCCATTCTTGTAAAT      
JMFF033D09+           CCTTCAAGGCTGGTCTATTTCTCCAGTCTACATACCCTTCCCATTCTTGTAAATAGGGTC
                      ____________________________________________________________
consensus             CCTTCAAGGCTGGTCTATTTCTCCAGTCTACATACCCTTCCCATTCTTGTAAATAGGGTC
 
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JMFF033D09+           CCGTGTCCATTTCTTAAGAGATTTCTGGATATCCAAACCTTGATCGAAAGTTTTCACGTT
                      ____________________________________________________________
consensus             CCGTGTCCATTTCTTAAGAGATTTCTGGATATCCAAACCTTGATCGAAAGTTTTCACGTT