clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009O17 | Sequence | 513 | 004585 (3) | ref|XP_002522268.1| | 4e-83 | conserved hypothetical protein [Ricinus communis] gb|EEF40126.1| conserved hypot | 772 | 012353 (2) | ref|XP_006356095.1| | 449 | PREDICTED: uncharacterized protein LOC102583650 [Solanum tuberosum] |
JMFF032N14 | Sequence | 567 | 004585 (3) | ref|XP_006356095.1| | 260 | PREDICTED: uncharacterized protein LOC102583650 [Solanum tuberosum] | 582 | 012353 (2) | ref|XP_011101444.1| | 116 | PREDICTED: uncharacterized protein LOC105179496 [Sesamum indicum] ref|XP_0111014 |
JMFS158A12 | Sequence | 475 | 004585 (3) | ref|XP_009590972.1| | 4e-63 | PREDICTED: uncharacterized protein LOC104088063 isoform X2 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMFF009O17+ ACCAGACCCAAATGGCCCTACTTTTTGGCCATTTTTTGGGCACTT
JMFF032N14+ TACTTTTTGGCCATTTTTTGGGCACTT
____________________________________________________________
consensus ACCAGACCCAAATGGCCCTACTTTTTGGCCATTTTTTGGGCACTT
. : . : . : . : . : . :
JMFF009O17+ TCCTGCATAAGTATCCATGTTGCCATTCTTCAGCATGATCATCCAGAATTGCCATGGTTT
JMFS158A12+ GAATTGCCATGGTTT
JMFF032N14+ TCCTGCATAAGTATCCATGTTGCCATTCTTCAGCATGATCATCCAGAATTGCCATGGTTT
____________________________________________________________
consensus TCCTGCATAAGTATCCATGTTGCCATTCTTCAGCATGATCATCCAGAATTGCCATGGTTT
. : . : . : . : . : . :
JMFF009O17+ CGGGGTGTCGTCAACCTGACATTTTGAGCCTAAGTAGAGCTCTTTCTGTGCAGCATAAAG
JMFS158A12+ CGGGGTGTCGTCAACCTGACATTTTGAGCCTAAGTAGAGCTCTTTCTGTGCAGCATAAAG
JMFF032N14+ CGGGGTGTCGTCAACCTGACATTTTGAGCCTAAGTAGAGCTCTTTCTGTGCAGCATAAAG
____________________________________________________________
consensus CGGGGTGTCGTCAACCTGACATTTTGAGCCTAAGTAGAGCTCTTTCTGTGCAGCATAAAG
. : . : . : . : . : . :
JMFF009O17+ GTCTGCATTGGACACTGCTTTTGGTTCCACTCCAAGAAAAGATTGCCCAATTCCTAGCTT
JMFS158A12+ GTCTGCATTGGACACTGCTTTTGGTTCCACTCCAAGAAAAGATTGCCCAATTCCTAGCTT
JMFF032N14+ GTCTGCATTGGACACTGCTTTTGGTTCCACTCCAAGAAAAGATTGCCCAATTCCTAGCTT
____________________________________________________________
consensus GTCTGCATTGGACACTGCTTTTGGTTCCACTCCAAGAAAAGATTGCCCAATTCCTAGCTT
. : . : . : . : . : . :
JMFF009O17+ GTTTTCCTCCTCTGTCACCCTGTGGACCAACATGTATGGGACTAACTTGCAGAAAGAGCA
JMFS158A12+ GTTTTCCTCCTCTGTCACCCTGTGGACCAACATGTATGGGACTAACTTGCAGAAAGAGCA
JMFF032N14+ GTTTTCCTCCTCTGTCACCCTGTGGACCAACATGTATGGGACTAACTTGCAGAAAGAGCA
____________________________________________________________
consensus GTTTTCCTCCTCTGTCACCCTGTGGACCAACATGTATGGGACTAACTTGCAGAAAGAGCA
. : . : . : . : . : . :
JMFF009O17+ ATTGTTCTTCCCTTCAGACACAGAAGGAGAAGCCTTATAGACATCAAAACAATCTGCAGC
JMFS158A12+ ATTGTTCTTCCCTTCAGACAGAGAAGGAGAAGCCTTATAGACATCAAAACAATCTGCAGC
JMFF032N14+ ATTGTTCTTCCCTTCAGACAGAGAAGGAGAAGCCTTATAGACATCAAAACAATCTGCAGC
____________________________________________________________
consensus ATTGTTCTTCCCTTCAGACAGAGAAGGAGAAGCCTTATAGACATCAAAACAATCTGCAGC
. : . : . : . : . : . :
JMFF009O17+ TCTGGGGCTTCCCATGTTAGGAACCTCTTCTCCAACCTCATTACACTGGTTCCACCCTTC
JMFS158A12+ TCTGGGGCTTCCCATGTTAGGAACCTCTTCTCCACCCTCATTACACTGGTTCCACCCTTC
JMFF032N14+ TCTGGGGCTTCCCATGTTAGGAACCTCTTCTCCAACCTCATTACACTGGTTCCACCCTTC
____________________________________________________________
consensus TCTGGGGCTTCCCATGTTAGGAACCTCTTCTCCAACCTCATTACACTGGTTCCACCCTTC
. : . : . : . : . : . :
JMFF009O17+ TATGGCCAATCTCAGCCCATCCCTTGTCATCCCCGGATCCCCAACGGCTGAGATGTACTC
JMFS158A12+ TATGGCCAATCTCAGCCCATCCCTTGTCATCCCCGGATCCCCAACGGCTGAGATGTACTC
JMFF032N14+ TATGGCCAATCTCAGCCCATCCCTTGTCATCCCCGGATCCCCAACGGCTGAGATGTACTC
____________________________________________________________
consensus TATGGCCAATCTCAGCCCATCCCTTGTCATCCCCGGATCCCCAACGGCTGAGATGTACTC
. : . : . : . : . : . :
JMFF009O17+ ACCCTCCTCACCATATCCAAGGCACAACACCTTAGGAACAGACACATT
JMFS158A12+ ACCCTCCTCACCATATCCAAGGCACAACACCTTAGGAACAGACACATTGAACAAAACAAT
JMFF032N14+ ACCCTCCTCACCATATCCAAGGCACAACACCTTAGGAACAGACACATTGAACAAAACAAT
____________________________________________________________
consensus ACCCTCCTCACCATATCCAAGGCACAACACCTTAGGAACAGACACATTGAACAAAACAAT
. : . : . : . : . : . :
JMFS158A12+ GAGATAATAAAGAACTAAAATACATTGAAGTTTTTGTTGA
JMFF032N14+ GAGATAATAAAGAACTAAAATACATTGAAGTTTTTGTTGAGCCATGGACAAGTTTCAAGC
____________________________________________________________
consensus GAGATAATAAAGAACTAAAATACATTGAAGTTTTTGTTGAGCCATGGACAAGTTTCAAGC