clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF027M16 | Sequence | 528 | 004582 (3) | ref|XP_006345991.1| | 193 | PREDICTED: uncharacterized protein LOC102591105, partial [Solanum tuberosum] | 649 | 010520 (4) | gb|EYU39518.1| | 2e-17 | hypothetical protein MIMGU_mgv1a007478mg [Erythranthe guttata] |
JMFF032G13 | Sequence | 472 | 004582 (3) | ref|XP_009625035.1| | 166 | PREDICTED: uncharacterized protein LOC104115988 [Nicotiana tomentosiformis] | 590 | 010520 (4) | gb|EYU39518.1| | 5e-14 | hypothetical protein MIMGU_mgv1a007478mg [Erythranthe guttata] |
JMFN006D19 | Sequence | 626 | 004582 (3) | ref|XP_009625035.1| | 203 | PREDICTED: uncharacterized protein LOC104115988 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN006D19+ TTCTCGCTCTTCGTCTTCTGAGTTGTGATATTCTAGAATATTCCTCTTTTCAAGTTCTA
____________________________________________________________
consensus TTCTCGCTCTTCGTCTTCTGAGTTGTGATATTCTAGAATATTCCTCTTTTCAAGTTCTA
. : . : . : . : . : . :
JMFN006D19+ GATCCTTCTTGTAACCCGACGCCGTGGACATCAGATCGCTTAGCGGCATGCTTCGCGAGG
____________________________________________________________
consensus GATCCTTCTTGTAACCCGACGCCGTGGACATCAGATCGCTTAGCGGCATGCTTCGCGAGG
. : . : . : . : . : . :
JMFN006D19+ TACCGGTGTTCTCCTGCAGCGTGGCGGACATATTGAGCAGTCCCTGAGGAGAACCCGAAG
JMFF027M16+ CCTGCAGCGTGGCGGACATATTGAGCAGTCCCTGAGGAGAACCCGAAG
____________________________________________________________
consensus TACCGGTGTTCTCCTGCAGCGTGGCGGACATATTGAGCAGTCCCTGAGGAGAACCCGAAG
. : . : . : . : . : . :
JMFN006D19+ GACGGCGAATCTGGAGGGCCACCTCTCTCGTTCCCTTCTCCGACGGCGAGATGAGATTGC
JMFF027M16+ GACGGCGAATCTGGAGGGCCACCTCTCTCGTTCCCTTCTCCGACGGCGAGATGAGATTGC
JMFF032G13+ ATCTGGAGGGCCACCTCTCTCGTTCCCTTCTCCGACGGCGAGATGAGATTGC
____________________________________________________________
consensus GACGGCGAATCTGGAGGGCCACCTCTCTCGTTCCCTTCTCCGACGGCGAGATGAGATTGC
. : . : . : . : . : . :
JMFN006D19+ TAACATTCACCGAAACGGTTCCGACGAGAACGTCGCGGAACCACGAAACCGTGTAGATCT
JMFF027M16+ TAACATTCACCGAAACGGTTCCGACGAGAACGTCGCGGAACCACGAAACCGTGTAGATCT
JMFF032G13+ TAACATTCACCGAAACGGTTCCGACGAGAACGTCGCGGAACCACGAAACCGTGTAGATCT
____________________________________________________________
consensus TAACATTCACCGAAACGGTTCCGACGAGAACGTCGCGGAACCACGAAACCGTGTAGATCT
. : . : . : . : . : . :
JMFN006D19+ CGACGGTGACGGTAGATTTCTCGGAGGCGAGGAACTCATCGTCAACCTTGAAGGAAAACT
JMFF027M16+ CGACGGTGACGGTAGATTTCTCGGAGGCGAGGAACTCATCGTCAACCTTGAAGGAAAACT
JMFF032G13+ CGACGGTGACGGTAGATTTCTCGGAGGCGAGGAACTCATCGTCAACCTTGAAGGAAAACT
____________________________________________________________
consensus CGACGGTGACGGTAGATTTCTCGGAGGCGAGGAACTCATCGTCAACCTTGAAGGAAAACT
. : . : . : . : . : . :
JMFN006D19+ TGTCGTTCCAGGTAGGATTCGCGTTGCCGTTCTGATCGATGCAGGTTGTCCGTTTCCGAT
JMFF027M16+ TGTCGTTCCAGGTAGGATTCGCGTTGCCGTTCTGATCGATGCAGGTTGTCCGTTTCCGAT
JMFF032G13+ TGTCGTTCCAGGTAGGATTCGCGTTGCCGTTCTGATCGATGCAGGTTGTCCGTTTCCGAT
____________________________________________________________
consensus TGTCGTTCCAGGTAGGATTCGCGTTGCCGTTCTGATCGATGCAGGTTGTCCGTTTCCGAT
. : . : . : . : . : . :
JMFN006D19+ TCGGATTGGTCCAGACGAGGGCGTAGGTGCGGAGGGACTTTGAGACGGGAGGCAGATCCT
JMFF027M16+ TCGGATTGGTCCAGACGAGGGCGTAGGTGCGGAGGGACTTTGAGACGGGAGGCAGATCCT
JMFF032G13+ TCGGATTGGTCCAGACGAGGGCGTAGGTGCGGAGGGACTTTGAGACGGGAGGCAGATCCT
____________________________________________________________
consensus TCGGATTGGTCCAGACGAGGGCGTAGGTGCGGAGGGACTTTGAGACGGGAGGCAGATCCT
. : . : . : . : . : . :
JMFN006D19+ GGGCGGAGATGAGGGTGATCTCTAAGATGTGGTAGCCGACCGGAGGGCGGGAGAGGCATG
JMFF027M16+ GGGCGGAGATGAGGGTGATCTCTAAGATGTGGTAGCCGACCGGAGGGCGGGAGAGGCATG
JMFF032G13+ GGGCGGAGATGAGGGTGATCTCTAAGATGTGGTAGCCGACCGGAGGGCGGGAGAGGCATG
____________________________________________________________
consensus GGGCGGAGATGAGGGTGATCTCTAAGATGTGGTAGCCGACCGGAGGGCGGGAGAGGCATG
. : . : . : . : . : . :
JMFN006D19+ AGACGTCGGAAACAGTGATTACGGAGTTCGCCGCGGTGGCGTCGTTGTAGTGATCCATTC
JMFF027M16+ AGACGTCGGAAACAGTGATTACGGAGTTCGCCGCGGTGGCGTCGTTGTAGTGATCCATTC
JMFF032G13+ AGACGTCGGAAACAGTGATTACGGAGTTCGCCGCGGTGGCGTCGTTGTAGTGATCCATTC
____________________________________________________________
consensus AGACGTCGGAAACAGTGATTACGGAGTTCGCCGCGGTGGCGTCGTTGTAGTGATCCATTC
. : . : . : . : . : . :
JMFN006D19+ TTTCACCGTCCAGTCCGCGGCGGAGAT
JMFF027M16+ TTTCACCGTCCAGTCCGCGGCGGAGATGATCTACCGTTCCGGCTAAACCA
JMFF032G13+ TTTCACCGTCCAGTCCGCGGCGGAGATGATCTACCGTTCCGGCTAAACCACCGGTACCAG
____________________________________________________________
consensus TTTCACCGTCCAGTCCGCGGCGGAGATGATCTACCGTTCCGGCTAAACCACCGGTACCAG