Contig 004581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032D08Sequence552004581 (2)emb|CDP18251.1|9e-60unnamed protein product [Coffea canephora]670008379 (2)ref|XP_004230306.1|96.7PREDICTED: uncharacterized protein LOC101248334 [Solanum lycopersicum]
JMFF048M14Sequence314004581 (2)emb|CDP18251.1|7e-22unnamed protein product [Coffea canephora]169008379 (2)

Alignment

This contig is upended


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JMFF032D08+ TTAGGAATGCTT
                      ____________________________________________________________
consensus TTAGGAATGCTT
 
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JMFF032D08+ CGGTCATTGTACCCCCTAAGTAAAGCGCTTCAAAAAAATCCCATCCCGAAGAAATGATAG
                      ____________________________________________________________
consensus CGGTCATTGTACCCCCTAAGTAAAGCGCTTCAAAAAAATCCCATCCCGAAGAAATGATAG
 
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JMFF032D08+ GACCAATAACTCGCTTGGCTTGTCGTTTTGCCAGTTTGGCAGCTTTCGCTCCTTCTTTCT
                      ____________________________________________________________
consensus GACCAATAACTCGCTTGGCTTGTCGTTTTGCCAGTTTGGCAGCTTTCGCTCCTTCTTTCT
 
. : . : . : . : . : . :
JMFF032D08+ GAGCTAGTTTAGCTGCTTCCTTCGCAACCATGCCTTGGGATATGGCATCAGCCAGAGCAC
                      ____________________________________________________________
consensus GAGCTAGTTTAGCTGCTTCCTTCGCAACCATGCCTTGGGATATGGCATCAGCCAGAGCAC
 
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JMFF048M14+ CTCTGATATTATAAAAGTACA
JMFF032D08+ TTTCAATTGCGAGATTCCTCGCTCTCTCAATGTGAGAGCCTCTGATATTATAAAAGTACA
                      ____________________________________________________________
consensus TTTCAATTGCGAGATTCCTCGCTCTCTCAATGTGAGAGCCTCTGATATTATAAAAGTACA
 
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JMFF048M14+ GCTTTACACCCTCCTTGACAACACATGCTAAGGTTCCGGTGCCCCCATCTAAGCAGTTCA
JMFF032D08+ GCTTTACACCCTCCTTGACAACACATGCTAAGGTTCCGGTGCCCCCATCTAAGCAGTTCA
                      ____________________________________________________________
consensus GCTTTACACCCTCCTTGACAACACATGCTAAGGTTCCGGTGCCCCCATCTAAGCAGTTCA
 
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JMFF048M14+ AGATATTAAAGTCCCCACTTTTGGACGCAGCCTCTTTACCAACTACTTCCCTACATTTTT
JMFF032D08+ AGATATTAAAGTCCCCACTTTTGGACGCAGCCTCTTTACCAACTACTTCCCTACATTTTT
                      ____________________________________________________________
consensus AGATATTAAAGTCCCCACTTTTGGACGCAGCCTCTTTACCAACTACTTCCCTACATTTTT
 
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JMFF048M14+ CAGCGGTGATACTGAGAACAGCGATGACAACCACGGCGATGAGGAACTGAACCCTCTTCT
JMFF032D08+ CAGCGGTGATACTGAGAACAGCGATGACAACCACGGCGATGAGGAACTGAACCCTCTTCT
                      ____________________________________________________________
consensus CAGCGGTGATACTGAGAACAGCGATGACAACCACGGCGATGAGGAACTGAACCCTCTTCT
 
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JMFF048M14+ TCTCGATCATTCTTGCCTTCAATTCACCACTTCTAACTGTTAAATGAACTCCTAATATTC
JMFF032D08+ TCTCGATCATTCTTGCCTTCAATTCACCACTTCTAACTGTTAAATGAACTCCTAATATTC
                      ____________________________________________________________
consensus TCTCGATCATTCTTGCCTTCAATTCACCACTTCTAACTGTTAAATGAACTCCTAATATTC
 
. : . : . : . : . : . :
JMFF048M14+ AAATCTCAAGTCTTTAATGCGCAACATTCAGTTATAGACTTCCA
JMFF032D08+ AAATCTCAAGTCTTTAATGCGCAACATTCAGTTATAGACTTCCATGGCGAACTTAATAAG
                      ____________________________________________________________
consensus AAATCTCAAGTCTTTAATGCGCAACATTCAGTTATAGACTTCCATGGCGAACTTAATAAG