Contig 004580:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031G13Sequence397004580 (2)ref|XP_009595359.1|2e-31PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Nicotiana 563001228 (2)emb|CBI22027.3|5e-85unnamed protein product [Vitis vinifera]
JMFN034F04Sequence583004580 (2)ref|XP_007044098.1|6e-68FtsH extracellular protease family isoform 2, partial [Theobroma cacao] gb|EOX9

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN034F04+ CCCGCAACATCATCAAATGTCACACCGGTGTTC
                      ____________________________________________________________
consensus CCCGCAACATCATCAAATGTCACACCGGTGTTC
 
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JMFN034F04+ GGTATCATTTGGAACTTAGCTTTGATTTGGCCAAAGGCCAACGGGAAACCGGGGCCGCCA
                      ____________________________________________________________
consensus GGTATCATTTGGAACTTAGCTTTGATTTGGCCAAAGGCCAACGGGAAACCGGGGCCGCCA
 
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JMFN034F04+ GGGCCGCCCATTCCTCCAGAAGACCGCCTCGATAATAGGAACAAACCCCCAATCAAGATA
                      ____________________________________________________________
consensus GGGCCGCCCATTCCTCCAGAAGACCGCCTCGATAATAGGAACAAACCCCCAATCAAGATA
 
. : . : . : . : . : . :
JMFN034F04+ AGCGGGAATGCCAAGTTTCCAATCAAGTTAAACAACAGAGAGCCAGACTCCTCTTGAGCA
                      ____________________________________________________________
consensus AGCGGGAATGCCAAGTTTCCAATCAAGTTAAACAACAGAGAGCCAGACTCCTCTTGAGCA
 
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JMFN034F04+ TTGTGTGCAGCGAAATCGATATTCTTTTCCCTGAACTTTTGAAGGAGTTCCTGGTTGAGC
                      ____________________________________________________________
consensus TTGTGTGCAGCGAAATCGATATTCTTTTCCCTGAACTTTTGAAGGAGTTCCTGGTTGAGC
 
. : . : . : . : . : . :
JMFN034F04+ CCGGGTAACTGCACCCGAACTCTCTGAACCCGATTGCCCAACTCTGGAGATATTGCCTCA
                      ____________________________________________________________
consensus CCGGGTAACTGCACCCGAACTCTCTGAACCCGATTGCCCAACTCTGGAGATATTGCCTCA
 
. : . : . : . : . : . :
JMFN034F04+ ACAATAGCTATGGTTCCATTTTCGAACAAATCTACCTTTTGCACCCTATCCTTATCCAAG
JMFF031G13+ AAATCTACCTTTTGCACCCTATCCTTATCCAAG
                      ____________________________________________________________
consensus ACAATAGCTATGGTTCCATTTTCGAACAAATCTACCTTTTGCACCCTATCCTTATCCAAG
 
. : . : . : . : . : . :
JMFN034F04+ TACTCCAAAAATCGAGAATAAGACATCCTGGAGTTTGAGACCCCTTGTTCCTCCGCATAA
JMFF031G13+ TACTCCAAAAATCGAGAATAAGACATCCTGGAGTTTGAGACCCCTTGTTCCCCCGCATAA
                      ____________________________________________________________
consensus TACTCCAAAAATCGAGAATAAGACATCCTGGAGTTTGAGACCCCTTGTTCCTCCGCATAA
 
. : . : . : . : . : . :
JMFN034F04+ GCTTTCCCACTACCTAACAATGCAGGNNCAGCAAGACCAGCATTCCCGAGTAATAATTTC
JMFF031G13+ GCTTTCCCNCTACCTAACAANGCAGGTACAGCAAGACCAGCATTCCCGAGTAATAATTTC
                      ____________________________________________________________
consensus GCTTTCCCACTACCTAACAATGCAGGTACAGCAAGACCAGCATTCCCGAGTAATAATTTC
 
. : . : . : . : . : . :
JMFN034F04+ AAAAAGCCTCTTCTACCCTCACGCGAATTCTGGTCCAGGGACGCCTTTGCAACGACAACT
JMFF031G13+ AAAAAGCCTCTTCTACCCTCACGCGAATTCTGGTCCAGGGACGCCTTTGCAACGACAACT
                      ____________________________________________________________
consensus AAAAAGCCTCTTCTACCCTCACGCGAATTCTGGTCCAGGGACGCCTTTGCAACGACAACT
 
. : . : . : . : . : . :
JMFN034F04+ TTTGATGTCT
JMFF031G13+ TTTGATGTCTTGCTACGTGATGGCAAGCGTGAAGCAAATAAAAGGTGCCTTCCATAAATT
                      ____________________________________________________________
consensus TTTGATGTCTTGCTACGTGATGGCAAGCGTGAAGCAAATAAAAGGTGCCTTCCATAAATT
 
. : . : . : . : . : . :
JMFF031G13+ TCTTTCGATAAACCATTTCCCGCTATGCACACTGATGAAGTTGCCATCTTGGCAAATTCC
                      ____________________________________________________________
consensus TCTTTCGATAAACCATTTCCCGCTATGCACACTGATGAAGTTGCCATCTTGGCAAATTCC
 
. : . : . : . : . : . :
JMFF031G13+ CAGTAATCTGAAAATCCGGAGAGAGCTGAGGAGAGAGAGAGTGAGATGAAGAAAGGGTTT
                      ____________________________________________________________
consensus CAGTAATCTGAAAATCCGGAGAGAGCTGAGGAGAGAGAGAGTGAGATGAAGAAAGGGTTT