Contig 004579:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006D24Sequence556004579 (10)ref|XP_009589936.1|1e-95PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico759005852 (11)ref|XP_009781056.1|3e-110PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF018C08Sequence573004579 (10)ref|XP_009589936.1|7e-94PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico770005852 (11)ref|XP_009781056.1|3e-109PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF022E06Sequence185004579 (10)ref|XP_009589936.1|2e-10PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico730005852 (11)ref|XP_006346729.1|8e-103PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMFF031D09Sequence521004579 (10)ref|XP_009589936.1|9e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico729005852 (11)ref|XP_009781056.1|2e-112PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF043M16Sequence619004579 (10)ref|XP_009589936.1|2e-111PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico550005852 (11)ref|XP_004237482.1|3e-38PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Solanum l
JMFF050A23Sequence595004579 (10)ref|XP_009589936.1|1e-93PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico606005852 (11)ref|XP_006346729.1|2e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMFF051J14Sequence577004579 (10)ref|XP_009589936.1|1e-97PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico522005852 (11)ref|XP_004237482.1|1e-37PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Solanum l
JMSF034B15Sequence696004579 (10)ref|XP_010261003.1|2e-120PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu755005852 (11)ref|XP_009781056.1|3e-113PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMSF048M07Sequence661004579 (10)ref|XP_010261003.1|2e-116PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu767005852 (11)ref|XP_006346729.1|7e-91PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMSF052G14Sequence706004579 (10)ref|XP_010261003.1|2e-137PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu959005852 (11)ref|XP_009781056.1|1e-132PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052G14+ ATGTGAGTAATACC
                      ____________________________________________________________
consensus ATGTGAGTAATACC
 
. : . : . : . : . : . :
JMSF052G14+ GAATCATTAGTTCATAGTAGATCCGCTTCAACTCCAACAGCGATGGAATATCTGCAGGAG
JMSF034B15+ ATCTGCAGGAG
                      ____________________________________________________________
consensus GAATCATTAGTTCATAGTAGATCCGCTTCAACTCCAACAGCGATGGAATATCTGCAGGAG
 
. : . : . : . : . : . :
JMSF052G14+ GCTCTTCCACTACAGCTTCACCTTCTTTTGGTTTTTTCTTCTCTTTCGAAGTATCAGCCT
JMSF048M07+ CCACTACAGCTTCACCTTCTTTTGGTTTTTTCTTCTCTTTCGAAGTATCAGCCT
JMFF043M16+ GAAGTATCAGCCT
JMSF034B15+ GCTCTTCCACTACAGCTTCACCTTCTTTTGGTTTTTTCTTCTCTTTCGAAGTATCAGCCT
                      ____________________________________________________________
consensus GCTCTTCCACTACAGCTTCACCTTCTTTTGGTTTTTTCTTCTCTTTCGAAGTATCAGCCT
 
. : . : . : . : . : . :
JMSF052G14+ CAAAAACTCTAGGATTGATCTTTCGTGAGAGAATTTGTGCCCGTACGTAATCTTGGCGGT
JMSF048M07+ CAAAAACTCTAGGATTGATCTTTCGTGAGAGAATTTGTGCCCGTACGTAATCTTGGCGGT
JMFF043M16+ CAAAAACTCTAGGATTGATCTNTCGTGAGAGAATTTGTGCCCGTACGTAATCTNGGCGGT
JMFF051J14+ TGCCCGTACGTAATCTGGCGGGT
JMFF006D24+ GT
JMSF034B15+ CAAAAACTCTAGGATTGATCTTTCGTGAGAGAATTTGTGCCCGTACGTAATCTNGGCGGT
                      ____________________________________________________________
consensus CAAAAACTCTAGGATTGATCTTTCGTGAGAGAATTTGTGCCCGTACGTAATCTTGGCGGT
 
. : . : . : . : . : . :
JMSF052G14+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMSF048M07+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMFF043M16+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMFF051J14+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTGNCCATTGCCC
JMFF006D24+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMSF034B15+ CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMFF018C08+ AAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
JMFF050A23+ AAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTNTTCAGTTTTTGCCATTGCCC
                      ____________________________________________________________
consensus CTAAACATAGACGCACTTGTTCAAGAATGAAAGCAATTTTTTCAGTTTTTGCCATTGCCC
 
. : . : . : . : . : . :
JMSF052G14+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMSF048M07+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF043M16+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF051J14+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF006D24+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMSF034B15+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF018C08+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF050A23+ CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
JMFF031D09+ TTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
                      ____________________________________________________________
consensus CAAATGTTTCAACCGCAATTTCTTGCATCAAATCAGCAGCGTCAGCTATGAGTCCCTGCT
 
. : . : . : . : . : . :
JMSF052G14+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMSF048M07+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF043M16+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF051J14+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF006D24+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMSF034B15+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF018C08+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF050A23+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
JMFF031D09+ CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
                      ____________________________________________________________
consensus CTTCTTTTATTTTTGCAAGTTTCTTAATCAAGCGAGCCCTCTCTATCTCAACATATATCT
 
. : . : . : . : . : . :
JMSF052G14+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMSF048M07+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF043M16+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF051J14+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF006D24+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMSF034B15+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF018C08+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF050A23+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
JMFF031D09+ TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
                      ____________________________________________________________
consensus TCCCAGCAGACACATTGTTAAGAGTTTTGATAAGTTCAATCTTAGTTTCCAGATCTGGAG
 
. : . : . : . : . : . :
JMSF052G14+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMSF048M07+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF043M16+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF051J14+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF006D24+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMSF034B15+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF018C08+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF050A23+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
JMFF031D09+ TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
                      ____________________________________________________________
consensus TCTGGTCAATGTATTCCATTGCTTGTCGAACCATGGCTTGTACAGCCTGCTTGAGTTGAC
 
. : . : . : . : . : . :
JMSF052G14+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMSF048M07+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF043M16+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF051J14+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF006D24+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMSF034B15+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF018C08+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF050A23+ CACGACGCTTGGACAAGAGAACAATCTGTTCATTGATGGTTTTCCAGGCGCACGCTTCGA
JMFF031D09+ CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
                      ____________________________________________________________
consensus CACGACGCTTGGACAAGAGAACAATCTGATCATTGATGGTTTTCCAGGCGCACGCTTCGA
 
. : . : . : . : . : . :
JMSF052G14+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMSF048M07+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF043M16+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF051J14+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF006D24+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMSF034B15+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF018C08+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF050A23+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF022E06+ TCCGGGTGCCGGCCACATCGCCGGCTTGCC
JMFF031D09+ AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
                      ____________________________________________________________
consensus AGCAGAGCTGCAGAATTTCGCTAACGGCCTTCCGGGTGCCGGCCACATCGCCGGCTTGCC
 
. : . : . : . : . : . :
JMSF052G14+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMSF048M07+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF043M16+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF051J14+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF006D24+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMSF034B15+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF018C08+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF050A23+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF022E06+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
JMFF031D09+ TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
                      ____________________________________________________________
consensus TCATCTGCTTCTCGACATTCAGCAGGGCCTCTATCTGTGCCTCCAATTTCCCGTCTCCTT
 
. : . : . : . : . : . :
JMSF052G14+ CCATCGCGGATTTGTATCTTGAATTCAAT
JMSF048M07+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF043M16+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF051J14+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF006D24+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMSF034B15+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF018C08+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF050A23+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATATGATTGAGCTCTGAAACCCT
JMFF022E06+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
JMFF031D09+ CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
                      ____________________________________________________________
consensus CCATCGCGGATTTGTATCTTGAATTCAATTCCAGGAAATCTGATTGAGCTCTGAAACCCT
 
. : . : . : . : . : . :
JMSF048M07+ AATTA
JMFF043M16+ AATTAT
JMFF051J14+ AATTATAGAAGAGA
JMFF006D24+ AATTATAGAAGAGA
JMSF034B15+ AATTATAGAAGAGAGAGGAGCTGC
JMFF018C08+ AATTATAGAAGAGAGAGGAGCTGCGATTTTATTAT
JMFF050A23+ AATTATAGAAGAGAGAGGAGCTGCGATTTTATTATGAGGGTTTTATCGAATGACTTC
JMFF022E06+ AATTATAGAAGAGAGAGGAGCTGCGATTTTATTAT
JMFF031D09+ AATTATAGAAGAGAGAGGAGCTGCGATTTTATTATGAGGGTTTTATCGAATGACTTCAGC
                      ____________________________________________________________
consensus AATTATAGAAGAGAGAGGAGCTGCGATTTTATTATGAGGGTTTTATCGAATGACTTCAGC