Contig 004557:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P01Sequence591004557 (6)ref|XP_006363008.1|2e-48PREDICTED: endoplasmin homolog [Solanum tuberosum]674001055 (5)ref|XP_009798975.1|5e-58PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF012H16Sequence592004557 (6)ref|XP_006363008.1|1e-47PREDICTED: endoplasmin homolog [Solanum tuberosum]791001055 (5)ref|XP_009798975.1|6e-83PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF016I08Sequence594004557 (6)ref|XP_006363008.1|2e-48PREDICTED: endoplasmin homolog [Solanum tuberosum]676001055 (5)ref|XP_009798975.1|1e-58PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF024K13Sequence474004557 (6)ref|XP_006363008.1|2e-09PREDICTED: endoplasmin homolog [Solanum tuberosum]607001055 (5)ref|XP_009605137.1|3e-35PREDICTED: heat shock protein 83 [Nicotiana tomentosiformis]
JMFS063B02Sequence615004557 (6)ref|XP_006363008.1|2e-49PREDICTED: endoplasmin homolog [Solanum tuberosum]
JMSF028E02Sequence666004557 (6)ref|XP_006363008.1|3e-56PREDICTED: endoplasmin homolog [Solanum tuberosum]735001055 (5)ref|XP_009798975.1|2e-80PREDICTED: heat shock protein 83 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF028E02+ TGAGCAATAGTACCAAGGCAG
                      ____________________________________________________________
consensus TGAGCAATAGTACCAAGGCAG
 
. : . : . : . : . : . :
JMFF010P01+ CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMFF012H16+ CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMFF016I08+ CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMSF028E02+ TCAACAAGTTCCTGGCGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
                      ____________________________________________________________
consensus TCAACAAGTTCCTGGCGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
 
. : . : . : . : . : . :
JMFF010P01+ TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFF012H16+ TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFF016I08+ TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMSF028E02+ TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFS063B02+ ATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
                      ____________________________________________________________
consensus TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
 
. : . : . : . : . : . :
JMFF010P01+ GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFF012H16+ GTAACACCAAGAAACCTCAAGNTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFF016I08+ GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMSF028E02+ GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFS063B02+ GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
                      ____________________________________________________________
consensus GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
 
. : . : . : . : . : . :
JMFF010P01+ AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFF012H16+ AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFF016I08+ AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMSF028E02+ AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFS063B02+ AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
                      ____________________________________________________________
consensus AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
 
. : . : . : . : . : . :
JMFF010P01+ TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF012H16+ TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF016I08+ TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMSF028E02+ TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFS063B02+ TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF024K13+ TGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
                      ____________________________________________________________
consensus TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
 
. : . : . : . : . : . :
JMFF010P01+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF012H16+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF016I08+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMSF028E02+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFS063B02+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF024K13+ GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
                      ____________________________________________________________
consensus GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
 
. : . : . : . : . : . :
JMFF010P01+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF012H16+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF016I08+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMSF028E02+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFS063B02+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF024K13+ ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
                      ____________________________________________________________
consensus ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
 
. : . : . : . : . : . :
JMFF010P01+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF012H16+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF016I08+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMSF028E02+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFS063B02+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF024K13+ CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
                      ____________________________________________________________
consensus CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
 
. : . : . : . : . : . :
JMFF010P01+ GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF012H16+ GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF016I08+ GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMSF028E02+ GAACCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFS063B02+ GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF024K13+ GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
                      ____________________________________________________________
consensus GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
 
. : . : . : . : . : . :
JMFF010P01+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF012H16+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF016I08+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMSF028E02+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFS063B02+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF024K13+ TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
                      ____________________________________________________________
consensus TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
 
. : . : . : . : . : . :
JMFF010P01+ GGGT
JMFF012H16+ GGGT
JMFF016I08+ GGGT
JMSF028E02+ GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTT
JMFS063B02+ GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
JMFF024K13+ GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
                      ____________________________________________________________
consensus GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
 
. : . : . : . : . : . :
JMFS063B02+ TTAGGCGAGGTTTAAGCGTT
JMFF024K13+ TTAGGCGAGGTTTAAGCGTTTAACGAAGCTTCTGGAGATGGGTCATAGTCTGCGTTTCAT
                      ____________________________________________________________
consensus TTAGGCGAGGTTTAAGCGTTTAACGAAGCTTCTGGAGATGGGTCATAGTCTGCGTTTCAT