Contig 004548:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003F09Sequence516004548 (3)gb|AFK39350.1|1e-98unknown [Lotus japonicus]698022286gb|AFU07481.1|1e-93phosphate transporter [Camellia oleifera]
JMFF022B05Sequence518004548 (3)gb|AFK39350.1|2e-97unknown [Lotus japonicus]687004015 (4)gb|AFU07481.1|4e-66phosphate transporter [Camellia oleifera]
JMSF052L06Sequence673004548 (3)ref|XP_010553420.1|4e-113PREDICTED: inorganic phosphate transporter 1-4 [Tarenaya hassleriana]864004015 (4)gb|AFU07481.1|2e-116phosphate transporter [Camellia oleifera]

Alignment

This contig is upended


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JMSF052L06+                                                              GGTGGAAGC
                      ____________________________________________________________
consensus                                                                GGTGGAAGC
 
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JMSF052L06+           TAAACCGTTTTCCTGATAGGTCGGTGCCGGAAACGCCGCCTTGAACGCCGCCGAGACGAC
                      ____________________________________________________________
consensus             TAAACCGTTTTCCTGATAGGTCGGTGCCGGAAACGCCGCCTTGAACGCCGCCGAGACGAC
 
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JMSF052L06+           GATCGCCACCACTCCGCCGGCGAGGATCCCGAACCCCTGCATCGCGAACACGGCGGCGAT
                      ____________________________________________________________
consensus             GATCGCCACCACTCCGCCGGCGAGGATCCCGAACCCCTGCATCGCGAACACGGCGGCGAT
 
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JMSF052L06+           GAACGCTCCCCTCGTCTTCTTGTTCGCGTACTCCGACATTATCGTCGCCGACAGCGGGTA
JMFF003F09+                                 TTCGCGTACTCCGACATTATCGTCGCCGACAGCGGGTA
JMFF022B05+                                 TTCGCGTACTCCGACATTATCGTCGCCGACAGCGGGTA
                      ____________________________________________________________
consensus             GAACGCTCCCCTCGTCTTCTTGTTCGCGTACTCCGACATTATCGTCGCCGACAGCGGGTA
 
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JMSF052L06+           GTCGCCGCCGATCCCGAACCCCAGCCAGAACCGGAAAAAGCAAAGAGTCGCCATAACTCC
JMFF003F09+           GTCGCCGCCGATCCCGAACCCCAGCCAGAACCGGAAAAAGCAAAGAGTCGCCATAACTCC
JMFF022B05+           GTCGCCGCCGATCCCGAACCCCAGCCAGAACCGGAAAAAGCAAAGAGTCGCCATAACTCC
                      ____________________________________________________________
consensus             GTCGCCGCCGATCCCGAACCCCAGCCAGAACCGGAAAAAGCAAAGAGTCGCCATAACTCC
 
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JMSF052L06+           TTTCGAGCTATGCCCGAACGACAGCCCGGAAGCGATGGAGCAAATCACCATTAGCATAAG
JMFF003F09+           TTTCGAGCTATGCCCGAACGACAGCCCGGAAGCGATGGAGCAAATCACCATTAGCATAAG
JMFF022B05+           TTTCGAGCTATGCCCGAACGACAGCCCGGAAGCGATGGAGCAAATCACCATTAGCATAAG
                      ____________________________________________________________
consensus             TTTCGAGCTATGCCCGAACGACAGCCCGGAAGCGATGGAGCAAATCACCATTAGCATAAG
 
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JMSF052L06+           CGTCAAGCCGTAAACTTTCTTCCGCCCCATTTTATCCCCCAGCCACCCGAAAAACAGCTG
JMFF003F09+           CGTCAAGCCGTAAACTTTCTTCCGCCCCATTTTATCCCCCAGCCACCCGAAAAACAGCTG
JMFF022B05+           CGTCAAGCCGTAAACTTTCTTCCGCCCCATTTTATCCCCCAGCCACCCGAAAAACAGCTG
                      ____________________________________________________________
consensus             CGTCAAGCCGTAAACTTTCTTCCGCCCCATTTTATCCCCCAGCCACCCGAAAAACAGCTG
 
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JMSF052L06+           CCCCGCCAGCGTGCCGCAGAGGGCGACGCCGTTGACGGCGGCGGAAACCTTGGGCGGCAA
JMFF003F09+           CCCCGCCAGCGTGCCGCAGAGGGCGACGCCGTTGACGGCGGCGGAAACCTTGGGCGGCAA
JMFF022B05+           CCCCGCCAGCGTGCCGCAGAGGGCGACGCCGTTGACGGCGGCGGAAACCTTGGGCGGCAA
                      ____________________________________________________________
consensus             CCCCGCCAGCGTGCCGCAGAGGGCGACGCCGTTGACGGCGGCGGAAACCTTGGGCGGCAA
 
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JMSF052L06+           ACTGCCGGGTTTCGGTGCGCCGTCGACGTGGTAGTAAATCCGGCCGAGCAATTTGGTGAC
JMFF003F09+           ACTGCCGGGTTTCGGTGCGCCGTCGACGTGGTAGTAAATCCGGCCGAGCAATTTGGTGAC
JMFF022B05+           ACTGCCGGGTTTCGGTGCGCCGTCGACGTGGTAGTAAATCCGGCCGAGCAATTTGGTGAC
                      ____________________________________________________________
consensus             ACTGCCGGGTTTCGGTGCGCCGTCGACGTGGTAGTAAATCCGGCCGAGCAATTTGGTGAC
 
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JMSF052L06+           CAGAGAAATGCAGAAAAGGTCGTATGCGTCGGTGAAGAACCCCATTCCGGCAATCACAAT
JMFF003F09+           CAGAGAAATGCAGAAAAGGTCGTATGCGTCGGTGAAGAACCCCATTCCGGCAATCACAAT
JMFF022B05+           CAGAGAAATGCAGAAAAGGTCGTATGCGTCGGTGAAGAACCCCATTCCGGCAATCACAAT
                      ____________________________________________________________
consensus             CAGAGAAATGCAGAAAAGGTCGTATGCGTCGGTGAAGAACCCCATTCCGGCAATCACAAT
 
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JMSF052L06+           TGCAGTGAAATGGTACCATTGT                                      
JMFF003F09+           TGCAGTGAAATGGTACCATTGTGTT                                   
JMFF022B05+           TGCAGTGAAATGGTACCATTGTGTTCTGGCAACATCAAGTGCGTCCAGAACTCTCAGTTG
                      ____________________________________________________________
consensus             TGCAGTGAAATGGTACCATTGTGTTCTGGCAACATCAAGTGCGTCCAGAACTCTCAGTTG
 
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JMFF022B05+           ATCTCCGGCCATGGCTGCCACTCCTCAAAACTCCGGCAACAAAAGGAGAAACTAACCAGT
                      ____________________________________________________________
consensus             ATCTCCGGCCATGGCTGCCACTCCTCAAAACTCCGGCAACAAAAGGAGAAACTAACCAGT