Contig 004540:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003D16Sequence537004540 (4)gb|KCW45481.1|5e-96hypothetical protein EUGRSUZ_L007902, partial [Eucalyptus grandis]722004540 (4)gb|KCW45481.1|9e-62hypothetical protein EUGRSUZ_L007902, partial [Eucalyptus grandis]
JMFF021I19Sequence285004540 (4)250004540 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF003D16- CTATTACGCCAAAATCGGCAAGGCGTGGA
                      ____________________________________________________________
consensus CTATTACGCCAAAATCGGCAAGGCGTGGA
 
. : . : . : . : . : . :
JMFF003D16- AACGTGGTTATCTCCTCTACGGCCCTCCGGGCACCGGAAAATCTTCCATGGTGGCGGCTA
                      ____________________________________________________________
consensus AACGTGGTTATCTCCTCTACGGCCCTCCGGGCACCGGAAAATCTTCCATGGTGGCGGCTA
 
. : . : . : . : . : . :
JMFF003D16- TGGCGAATTTCCTTGGATACGACGTGTATGATTTGGAGCTAACCGCCGTGAAGGATAACA
                      ____________________________________________________________
consensus TGGCGAATTTCCTTGGATACGACGTGTATGATTTGGAGCTAACCGCCGTGAAGGATAACA
 
. : . : . : . : . : . :
JMFF003D16- CCACGCTCAGAAAACTCCTGATCGATACTTCCGGCAAGTCGATTATAGTAATCGAAGATA
                      ____________________________________________________________
consensus CCACGCTCAGAAAACTCCTGATCGATACTTCCGGCAAGTCGATTATAGTAATCGAAGATA
 
. : . : . : . : . : . :
JMFF003D16- TCGATTGCTCCCTGGACCTCACCGGCCAGAGGGAAGGGCAGACGAAAGATAAATCCGGCG
rJMFF003D16+ AAGGGCAGACGAAAGATAAATCCGGCG
                      ____________________________________________________________
consensus TCGATTGCTCCCTGGACCTCACCGGCCAGAGGGAAGGGCAGACGAAAGATAAATCCGGCG
 
. : . : . : . : . : . :
JMFF003D16- TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
rJMFF003D16+ TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
                      ____________________________________________________________
consensus TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
 
. : . : . : . : . : . :
JMFF003D16- TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
rJMFF003D16+ TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
                      ____________________________________________________________
consensus TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
 
. : . : . : . : . : . :
JMFF003D16- CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
rJMFF003D16+ CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
                      ____________________________________________________________
consensus CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
 
. : . : . : . : . : . :
JMFF003D16- ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
rJMFF003D16+ ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
                      ____________________________________________________________
consensus ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
 
. : . : . : . : . : . :
JMFF003D16- GAATCCAAACCCACGAGCTTTTCCCGAC
rJMFF003D16+ GAATCCAAACCCACGAGCTTTTCCCGACGGTGGGGCGGTTGTTGACCGAGACCGGCATGA
                      ____________________________________________________________
consensus GAATCCAAACCCACGAGCTTTTCCCGACGGTGGGGCGGTTGTTGACCGAGACCGGCATGA
 
. : . : . : . : . : . :
rJMFF003D16+ CGCCGGCGGATGTTGCGGAGAATTTGATGCCCAAAGCGGCCGAGGACGACGAGACTACGT
                      ____________________________________________________________
consensus CGCCGGCGGATGTTGCGGAGAATTTGATGCCCAAAGCGGCCGAGGACGACGAGACTACGT
 
. : . : . : . : . : . :
rJMFF003D16+ GTCTGGAGAAACTGGTTCAGGCTCTGGAGAAAGCTAAGGAAGACGCGAGACTGAAAGCAG
                      ____________________________________________________________
consensus GTCTGGAGAAACTGGTTCAGGCTCTGGAGAAAGCTAAGGAAGACGCGAGACTGAAAGCAG
 
. : . : . : . : . : . :
rJMFF021I19+ AGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
rJMFF003D16+ AGGGAGAAGAAGAGGAGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
JMFF021I19- AGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
                      ____________________________________________________________
consensus AGGGAGAAGAAGAGGAGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
 
. : . : . : . : . : . :
rJMFF021I19+ TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
rJMFF003D16+ TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
JMFF021I19- TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
                      ____________________________________________________________
consensus TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
 
. : . : . : . : . : . :
rJMFF021I19+ ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
rJMFF003D16+ ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
JMFF021I19- ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
                      ____________________________________________________________
consensus ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
 
. : . : . : . : . : . :
rJMFF021I19+ CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
rJMFF003D16+ CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
JMFF021I19- CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
                      ____________________________________________________________
consensus CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
 
. : . : . : . : . : . :
rJMFF021I19+ TTTTGCTTAAAAATAAATAAATAAA
rJMFF003D16+ TTTTGCTTAAAAATAAATAAATAAAATG
JMFF021I19- TTTTGCTTAAAAATAAATAAATAAAATGGTTCATCGTTGCATATGATTCCAAAAAAAAAA
                      ____________________________________________________________
consensus TTTTGCTTAAAAATAAATAAATAAAATGGTTCATCGTTGCATATGATTCCAAAAAAAAAA