Contig 004529:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G18Sequence584004529 (5)ref|XP_006845995.1|5e-92hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| 743011269 (5)gb|KDO75234.1|2e-140hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMFF027L02Sequence553004529 (5)ref|XP_006845995.1|5e-85hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| 717011269 (5)gb|KDO75234.1|1e-134hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF011C12Sequence279004529 (5)gb|AAF65513.1|2e-20GTP-binding protein [Capsicum annuum]806011269 (5)gb|KDO75234.1|1e-121hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF011D18Sequence353004529 (5)ref|XP_004231561.1|2e-38PREDICTED: obg-like ATPase 1 [Solanum lycopersicum]767011269 (5)gb|KDO75234.1|4e-118hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF051I08Sequence621004529 (5)ref|XP_004231561.1|6e-108PREDICTED: obg-like ATPase 1 [Solanum lycopersicum]693011269 (5)gb|KDO75234.1|3e-110hypothetical protein CISIN_1g015465mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051I08+ TCTCCATGAACTCAATATCCTTAAGCCTCAATTCCTCACTAATAACCTCCA
                      ____________________________________________________________
consensus TCTCCATGAACTCAATATCCTTAAGCCTCAATTCCTCACTAATAACCTCCA
 
. : . : . : . : . : . :
JMSF051I08+ AATCTCTCACAGGATCTACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
JMFF027L02+ TCTTCAAAGGCAC
JMFF017G18+ TACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
                      ____________________________________________________________
consensus AATCTCTCACAGGATCTACAGTATCATCAACATGTATAATATCTGAATCTTCAAAGGCAC
 
. : . : . : . : . : . :
JMSF051I08+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
JMFF027L02+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
JMFF017G18+ GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
                      ____________________________________________________________
consensus GTAAGACATGGAAAATGCCATCAACTGCACGGATATGAGATAAGAAACTATTCCCCAGTC
 
. : . : . : . : . : . :
JMSF051I08+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
JMFF027L02+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
JMFF017G18+ CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
                      ____________________________________________________________
consensus CTTGTCCTTCATGAGCACCTCTAACAAGTCCAGCTATATCATGAATTTCTAGGAAAGCTG
 
. : . : . : . : . : . :
JMSF051I08+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
JMFF027L02+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
JMSF011D18+ CTGGTACAT
JMFF017G18+ ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
                      ____________________________________________________________
consensus ACACCTCACTCTTTGGCTTGTACAGTTGGCACAGCCATTCAAATCTCTCATCTGGTACAT
 
. : . : . : . : . : . :
JMSF051I08+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMFF027L02+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMSF011D18+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
JMFF017G18+ TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
                      ____________________________________________________________
consensus TCACTCGAGCCTCATTGGGCTCAATAGTGCAAAACGGGAAGTTCTCTGCGGGAATTGACA
 
. : . : . : . : . : . :
JMSF051I08+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMFF027L02+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMSF011C12+ GTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMSF011D18+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
JMFF017G18+ ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
                      ____________________________________________________________
consensus ACTTCGTAAGCGTGTTAAAAAGTGTGGACTTTCCCACATTTGGTAATCCAACGATTCCAA
 
. : . : . : . : . : . :
JMSF051I08+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMFF027L02+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMSF011C12+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMSF011D18+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
JMFF017G18+ TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
                      ____________________________________________________________
consensus TTTTGAGGTGAGACGAGAAACGGCCGAGAATGGGCCGTTCAGCCGGAACTTCTTTGCCTT
 
. : . : . : . : . : . :
JMSF051I08+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMFF027L02+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMSF011C12+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMSF011D18+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
JMFF017G18+ TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
                      ____________________________________________________________
consensus TAGCAGCTTTTGGAGGCATCTCTTTTGCAGCTGAGAAGATCAGAAGACAAAGCGAAGAAC
 
. : . : . : . : . : . :
JMSF051I08+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMFF027L02+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMSF011C12+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMSF011D18+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
JMFF017G18+ TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
                      ____________________________________________________________
consensus TTCAAGCTTCCTGATAGATGTAGGAGCTTTAGGGTTTAGCGATTGTAGTATAGTACTGCA
 
. : . : . : . : . : . :
JMSF051I08+ GATACGCAGCTCCTCAGCGATGGCGGCGT
JMFF027L02+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC
JMSF011C12+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGC
JMSF011D18+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGC
JMFF017G18+ GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC
                      ____________________________________________________________
consensus GATACGCAGCTCCTCAGCGATGGCGGCGTGGTGGAGCTGTGCCACTGAAATTGGTAATCC