Contig 004519:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C09Sequence574004517 (2)ref|XP_006343674.1|83.2PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum]714004519 (4)ref|XP_004242571.1|127PREDICTED: uncharacterized protein DDB_G0287625 [Solanum lycopersicum]
JMFF015F08Sequence542004519 (4)ref|XP_006343674.1|105PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum]505004519 (4)ref|XP_006343674.1|105PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum]
JMFF029E02Sequence483004517 (2)ref|XP_006343674.1|81.3PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum]589004519 (4)ref|XP_004242571.1|124PREDICTED: uncharacterized protein DDB_G0287625 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015C09+ TTCACGGATGAAGCTAACATTGACGTTGTAG
                      ____________________________________________________________
consensus TTCACGGATGAAGCTAACATTGACGTTGTAG
 
. : . : . : . : . : . :
rJMFF015C09+ TGGAAGAGGGGGATGATAAAGACGATGACTTAGTGCAAAAAGATGAAAATATTGATAAGC
                      ____________________________________________________________
consensus TGGAAGAGGGGGATGATAAAGACGATGACTTAGTGCAAAAAGATGAAAATATTGATAAGC
 
. : . : . : . : . : . :
rJMFF029E02+ TCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
rJMFF015C09+ CTATGGGTAGAAGTGAAAATTGTGAGAGTTCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
                      ____________________________________________________________
consensus CTATGGGTAGAAGTGAAAATTGTGAGAGTTCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
 
. : . : . : . : . : . :
rJMFF029E02+ TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGGCAGGG
rJMFF015C09+ TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGACAGGG
rJMFF015F08+ GG
JMFF015F08- GG
                      ____________________________________________________________
consensus TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGGCAGGG
 
. : . : . : . : . : . :
rJMFF029E02+ CTGTGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
rJMFF015C09+ CTGTGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
rJMFF015F08+ CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
JMFF015F08- CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
                      ____________________________________________________________
consensus CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
 
. : . : . : . : . : . :
rJMFF029E02+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
rJMFF015C09+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
rJMFF015F08+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
JMFF015F08- ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
                      ____________________________________________________________
consensus ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
 
. : . : . : . : . : . :
rJMFF029E02+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
rJMFF015C09+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
rJMFF015F08+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
JMFF015F08- ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
                      ____________________________________________________________
consensus ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
 
. : . : . : . : . : . :
rJMFF029E02+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
rJMFF015C09+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
rJMFF015F08+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
JMFF015F08- TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
                      ____________________________________________________________
consensus TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
 
. : . : . : . : . : . :
rJMFF029E02+ ATGCTACAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
rJMFF015C09+ ATGCTACAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
rJMFF015F08+ ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
JMFF015F08- ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
                      ____________________________________________________________
consensus ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
 
. : . : . : . : . : . :
rJMFF029E02+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
rJMFF015C09+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
rJMFF015F08+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
JMFF015F08- GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
                      ____________________________________________________________
consensus GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
 
. : . : . : . : . : . :
rJMFF029E02+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
rJMFF015C09+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
rJMFF015F08+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
JMFF015F08- TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
                      ____________________________________________________________
consensus TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
 
. : . : . : . : . : . :
rJMFF029E02+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
rJMFF015C09+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
rJMFF015F08+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
JMFF015F08- TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
                      ____________________________________________________________
consensus TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
 
. : . : . : . : . : . :
rJMFF029E02+ AGTTGTACTGATTTTGAT
rJMFF015C09+ AGTTGTACTGATTTTGAT
rJMFF015F08+ AGTTGTACTGATTTTGAT
JMFF015F08- AGTTGTACTGATTTTGATATTAATGAAATTGTCTTCTTTTTTTGCTTTCCAAAAAAAAAA
                      ____________________________________________________________
consensus AGTTGTACTGATTTTGATATTAATGAAATTGTCTTCTTTTTTTGCTTTCCAAAAAAAAAA