Contig 004512:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A07Sequence411004512 (5)ref|XP_010649491.1|8e-51PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X2 [Vitis vinifera718005374 (5)gb|KJB34730.1|2e-86hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF013N11Sequence575004512 (5)ref|XP_009779748.1|1e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv710005374 (5)gb|KJB34731.1|8e-64hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF023P22Sequence479004512 (5)ref|XP_009779748.1|1e-58PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv694005374 (5)gb|KHF99088.1|1e-82Beta-glucosidase-like SFR2, chloroplastic [Gossypium arboreum]
JMFF026G08Sequence574004512 (5)ref|XP_009779748.1|2e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv689005374 (5)gb|KJB34730.1|2e-68hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF040G22Sequence572004512 (5)ref|XP_009779748.1|2e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv703005374 (5)gb|KJB34731.1|1e-64hypothetical protein B456_006G080700 [Gossypium raimondii]

Alignment

This contig is upended


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JMFF040G22+                                       ATTATGCCAGGCAGCAACAGTATGATGACATG
JMFF026G08+                                       ATTATGCCAGGCAGCAACAGTATGATGACATG
JMFF013N11+                                    AACATTATGCCAGGCAGCAACAGTATGATGACATG
                      ____________________________________________________________
consensus                                      AACATTATGCCAGGCAGCAACAGTATGATGACATG
 
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JMFF040G22+           CCTCGGCAGGCACAGATTCTTCTACTTCTATGTACTTCTCAAATCCTCTAATTTTTGCCT
JMFF026G08+           CCTCGGCAGGCACAGATTCTTCTACTTCTATGTACTTCTCAAATCCTCTAATTTTTGCCT
JMFF013N11+           CCTCGGCAGGCACAGATTCTTCTACTTCTATGTACTTCTCAAATCCTCTAATTTTTACCT
                      ____________________________________________________________
consensus             CCTCGGCAGGCACAGATTCTTCTACTTCTATGTACTTCTCAAATCCTCTAATTTTTGCCT
 
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JMFF040G22+           CCATAGCTATCTTAAGTGACTTCCTTCTTTTTATGGTCTGAGAAGCTGTTCTTGGTAGTA
JMFF023P22+            CATAGCTATCTTAAGTGACTTCCTTCTTTTTATGGTCTGAGAAGCTGTTCTTGGTAGTA
JMFF026G08+           CCATAGCTATCTTAAGTGACTTCCTTCTTTTTATGGTCTGAGAAGCTGTTCTTGGTAGTA
JMFF013N11+           CCATAGCTATCTTAAGTGACTTCCTTCTTTTTATGGTCTGAGAAGCTGTTCTTGGTAGTA
                      ____________________________________________________________
consensus             CCATAGCTATCTTAAGTGACTTCCTTCTTTTTATGGTCTGAGAAGCTGTTCTTGGTAGTA
 
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JMFF040G22+           CTGAAGCTTGTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
JMFF023P22+           CTGAAGCTTGTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
JMFF012A07+                    GTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
JMFF026G08+           CTGAAGCTTGTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
JMFF013N11+           CTGAAGCTTGTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
                      ____________________________________________________________
consensus             CTGAAGCTTGTTGGGTGCCACCATCACCTGTAGCAGAGGCCAATAGTGCATCTGCTAGTT
 
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JMFF040G22+           GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
JMFF023P22+           GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
JMFF012A07+           GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
JMFF026G08+           GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
JMFF013N11+           GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
                      ____________________________________________________________
consensus             GGGATTCATTATTTGATTTTGATTGTTCACAAGGAGTCTCTTCAGCAAACTGGAGCCAAG
 
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JMFF040G22+           CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
JMFF023P22+           CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
JMFF012A07+           CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
JMFF026G08+           CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
JMFF013N11+           CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
                      ____________________________________________________________
consensus             CATCATTAAGCCTGTCTTCCACATGTGCTGGTGCAGTTGCCAATCCGAAGAAGAACCCTT
 
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JMFF040G22+           TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
JMFF023P22+           TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
JMFF012A07+           TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
JMFF026G08+           TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
JMFF013N11+           TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
                      ____________________________________________________________
consensus             TCTCACCTTCGGCAGGATTAACGTCGAAGACGGCGAGAGTATCGAAAGACTCGTCAATGG
 
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JMFF040G22+           GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
JMFF023P22+           GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
JMFF012A07+           GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
JMFF026G08+           GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
JMFF013N11+           GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
                      ____________________________________________________________
consensus             GAGAACAGAAAGGCTTGAGATTCTTCTTGCGGTAATGGTTGTAGGAAAAAGCGTTGGCGG
 
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JMFF040G22+           CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
JMFF023P22+           CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
JMFF012A07+           CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
JMFF026G08+           CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
JMFF013N11+           CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
                      ____________________________________________________________
consensus             CGACCGAGAGCGTCACGAGGACTCCGGCGAGCTTCGTCGCCGATATGAAGAGTCCGACGA
 
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JMFF040G22+           GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTACGGTTACACGCTGTAGTAGACTAGT
JMFF023P22+           GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTAAGGTTACACGCTGTAGTAGACTAGT
JMFF012A07+           GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTAAGGTTACACGCTGTAGTAGACTAGT
JMFF026G08+           GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTAAGGTTACACGCTGTAGTAGACTAGT
JMFF013N11+           GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTACGGTTACACGCTGTAGTAGACTAGT
                      ____________________________________________________________
consensus             GCACCATTCCCGCTTCCCGAGAGCCGTGGGCGTTAAGGTTACACGCTGTAGTAGACTAGT