Contig 004502:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012G09Sequence512004502 (5)741002544 (4)ref|XP_006361676.1|2e-17PREDICTED: vacuolar amino acid transporter 1-like [Solanum tuberosum]
JMSF008M23Sequence361004502 (5)730002544 (4)gb|AFK35314.1|2e-70unknown [Lotus japonicus]
JMSF020N22Sequence680004502 (5)ref|XP_011084300.1|1e-35PREDICTED: vacuolar amino acid transporter 1 isoform X1 [Sesamum indicum]757002544 (4)gb|AFK35314.1|5e-30unknown [Lotus japonicus]
JMSF036N04Sequence706004502 (5)ref|XP_011084300.1|2e-39PREDICTED: vacuolar amino acid transporter 1 isoform X1 [Sesamum indicum]682002544 (4)gb|AFK35314.1|5e-64unknown [Lotus japonicus]
JMSF051G19Sequence661004502 (5)ref|XP_011084300.1|2e-33PREDICTED: vacuolar amino acid transporter 1 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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JMSF051G19+                                                    TTTGGCATGGGAACTTCAT
JMSF020N22+                                    GCCAAATGAGCTCTGCTTTGGCATGGGAACTTCAT
JMSF036N04+             TTAATGCCGTTNAGCACTGCTTGGCCAAATGAGCTCTGCTTTGGCATGGGAACTTCAT
                      ____________________________________________________________
consensus               TTAATGCCGTTNAGCACTGCTTGGCCAAATGAGCTCTGCTTTGGCATGGGAACTTCAT
 
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JMSF051G19+           GTGTGATTGTGGTGACTTTCCCATCAGGGGTAACTTTCTTTACAACAGAAGATCTTGATG
JMSF020N22+           GTGTGATTGTGGTGACTTTCCCATCAGGGGTAACTTTCTTTACAACAGAAGATCTTGATG
JMSF036N04+           GTGTGATTGTGGTGACTTTCCCATCAGGGGTAACTTTCTTTACAACAGAAGATCTTGATG
                      ____________________________________________________________
consensus             GTGTGATTGTGGTGACTTTCCCATCAGGGGTAACTTTCTTTACAACAGAAGATCTTGATG
 
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JMSF051G19+           GTATAGGAGGCAGCAAAGAATGCGAACTTCGTCTTTGCTGCTCCTCTTCTTTTGGTGGTA
JMSF020N22+           GTATAGGAGGCAGCAAAGAATGCGAACTTCGTCTTTGCTGCTCCTCTTCTTTTGGTGGTA
JMSF036N04+           GTATAGGAGGCAGCAAAGAATGCGAACTTCGTCTTTGCTGCTCCTCTTCTTTTGGTGGTA
                      ____________________________________________________________
consensus             GTATAGGAGGCAGCAAAGAATGCGAACTTCGTCTTTGCTGCTCCTCTTCTTTTGGTGGTA
 
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JMSF051G19+           AGAGTGGTTTATGCAGTGTAGGCAATACCTCAGGAGTGTGTCTCTTTGTAAGTGATGAGG
JMSF020N22+           AGAGTGGTTTATGCAGTGTAGGCAATACCTCAGGAGTGTGTCTCTTTGTAAGTGATGAGG
JMSF036N04+           AGAGTGGTTTATG-TGTGTAGGCAATACCTCAGGAGTGTGTCTCTTTGTAAGTGATGAGG
                      ____________________________________________________________
consensus             AGAGTGGTTTATGCAGTGTAGGCAATACCTCAGGAGTGTGTCTCTTTGTAAGTGATGAGG
 
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JMSF051G19+           AAAGAAACGAGCTGCCTAGACGTGACAGCGAGGGTGTACCCAGAAAGTTGATACTTGGAG
JMSF020N22+           AAAGAAACGAGCTGCCTAGACGTGACAGCGAGGGTGTACCCAGAAAGTTGATACTTGGAG
JMSF036N04+           AAAGAAACGAGCTGCCTAGACGTGACAGCGAGGGTGTACCCAGAAAGTTGATACTTGGAG
                      ____________________________________________________________
consensus             AAAGAAACGAGCTGCCTAGACGTGACAGCGAGGGTGTACCCAGAAAGTTGATACTTGGAG
 
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JMSF051G19+           AGGGTACACTACTATACAGATCAATAGATTGCCTGTAACTTTGCGGCCAAGCACTGGTGT
JMSF020N22+           AGGGTACACTACTATACAGATCAATAGATTGCCTGTAACTTTGCGGCCAAGCACTGGTGT
JMSF036N04+           AGGGTACACTACTATACAGATCAATAGATTGCCTGTAACTTTGCGGCCAAGCACTGGTGT
JMSF008M23+                                                             GCACTGGTGT
                      ____________________________________________________________
consensus             AGGGTACACTACTATACAGATCAATAGATTGCCTGTAACTTTGCGGCCAAGCACTGGTGT
 
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JMSF051G19+           ACGAATTGGGCTTACTCTGCTGGTGATCATTCTCGTTCTCGTTCTCATTCTCATTTTCAC
JMSF020N22+           ACGAATTGGGCTTACTCTGCTGGTGATCATTCTCGTTCTCGTTCTCATTCTCATTTTCAC
JMSF036N04+           ACGAATTGGGCTTACTCTGCTGGTGATCATTCTCGTTCTCGTTCTCATTCTCATTTTCAC
JMSF008M23+           ACGAATTGGGCTTACTCTGCTGGTGATCATTCTCGTTCTCGTTCTCATTCTCATTTTCAC
JMFF012G09+                                         TCTCGTTCTCGTTCTCATTCTCATTTTCAC
                      ____________________________________________________________
consensus             ACGAATTGGGCTTACTCTGCTGGTGATCATTCTCGTTCTCGTTCTCATTCTCATTTTCAC
 
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JMSF051G19+           GATCATTGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
JMSF020N22+           GATCATTGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
JMSF036N04+           GATCATTGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
JMSF008M23+           GATCATNGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
JMFF012G09+           GATCATTGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
                      ____________________________________________________________
consensus             GATCATTGGAGTAGTTGGAAAAATCAGATCCATGTCTTTCCCCAATTCCATATTCACCCT
 
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JMSF051G19+           TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
JMSF020N22+           TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
JMSF036N04+           TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
JMSF008M23+           TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
JMFF012G09+           TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
                      ____________________________________________________________
consensus             TCTCCTGTTCCTCATCCTCTTCCTCACTCTCTATGTAGAAACTGTGGTCAGACACTGAAT
 
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JMSF051G19+           TCTTCATAACTTTTTGCCTTAGAAGACCTTAAAATTCTGCTATTCTTCTTGTAGGGATGC
JMSF020N22+           TCTTCATAACTTTTTGCCTTAGAAGACCTTAAAATTCTGCTATTCTTCTTGTAGGGATGC
JMSF036N04+           TCTTCATAACTTTTTGCCTTAGAAGACCTTAAAATTCTGCTATTCTTCTTGTAGGGATGC
JMSF008M23+           TCTTCATAACTTTTTGCCTTAGAAGACCTTAAAATTCTGCTATTCTTCTTGTAGGGATGC
JMFF012G09+           TCTTCATAACTTTTTGCCNTAGAAGACCNTAAAATTCTGCTATTCTTCTTGTAGGGATGC
                      ____________________________________________________________
consensus             TCTTCATAACTTTTTGCCTTAGAAGACCTTAAAATTCTGCTATTCTTCTTGTAGGGATGC
 
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JMSF051G19+           TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
JMSF020N22+           TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
JMSF036N04+           TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
JMSF008M23+           TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
JMFF012G09+           TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
                      ____________________________________________________________
consensus             TCCGGAGTTAGAAATGCTACCGCTTTTCACCCTTTAGTACTTTCCAGAAGCTCCAAAACC
 
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JMSF051G19+           TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAAC                    
JMSF020N22+           TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAACTGCC                
JMSF036N04+           TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAACTGCC                
JMSF008M23+           TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAACTGCC                
JMFF012G09+           TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAACTGCCAAATACAGGGATGTGT
                      ____________________________________________________________
consensus             TCTCCTTTCTGAAAGAGAACAGCTTGGATGAGTGCCTAACTGCCAAATACAGGGATGTGT
 
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JMFF012G09+           TGTGCATATATATATATATATATCGAAAGAGATTGATTGCAGTTCATGCAGTGGACTGGT
                      ____________________________________________________________
consensus             TGTGCATATATATATATATATATCGAAAGAGATTGATTGCAGTTCATGCAGTGGACTGGT
 
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JMFF012G09+           GGAGAGGTAATAATGCAATTTACATAAAATGTTGGGCTCAAATATTATTATGAGTTTGAA
                      ____________________________________________________________
consensus             GGAGAGGTAATAATGCAATTTACATAAAATGTTGGGCTCAAATATTATTATGAGTTTGAA
 
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JMFF012G09+           CTTTGAAGCTATCATGATTCATGAATGTGCAAGGCGACGAATTGAAGGTTTGGTTTAATT
                      ____________________________________________________________
consensus             CTTTGAAGCTATCATGATTCATGAATGTGCAAGGCGACGAATTGAAGGTTTGGTTTAATT