Contig 004493:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D13Sequence530004493 (3)ref|XP_006351734.1|245PREDICTED: uncharacterized protein LOC102593259 [Solanum tuberosum]713002958 (3)ref|XP_009600013.1|152PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]
JMSF042I21Sequence764004493 (3)ref|XP_009600013.1|258PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]710002958 (3)ref|XP_009600013.1|157PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]
JMSF047P05Sequence692004493 (3)ref|XP_009600013.1|258PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]740002958 (3)ref|XP_009600013.1|157PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042I21+ GT
                      ____________________________________________________________
consensus GT
 
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JMSF042I21+ CTCGATTTAGAAACATTACAGGCTGCGGTTGCGGTTGCTGCTCTCTGCTCGAGCTTGGCT
                      ____________________________________________________________
consensus CTCGATTTAGAAACATTACAGGCTGCGGTTGCGGTTGCTGCTCTCTGCTCGAGCTTGGCT
 
. : . : . : . : . : . :
JMSF042I21+ GCTGCATGGAGGTCACAGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
JMSF047P05+ AGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
                      ____________________________________________________________
consensus GCTGCATGGAGGTCACAGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
 
. : . : . : . : . : . :
JMSF042I21+ AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
JMSF047P05+ AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
                      ____________________________________________________________
consensus AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
 
. : . : . : . : . : . :
JMSF042I21+ TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
JMSF047P05+ TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
                      ____________________________________________________________
consensus TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
 
. : . : . : . : . : . :
JMSF042I21+ GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
JMSF047P05+ GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
JMFF011D13+ CGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
                      ____________________________________________________________
consensus GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
 
. : . : . : . : . : . :
JMSF042I21+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
JMSF047P05+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
JMFF011D13+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
                      ____________________________________________________________
consensus TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
 
. : . : . : . : . : . :
JMSF042I21+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
JMSF047P05+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
JMFF011D13+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
                      ____________________________________________________________
consensus AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
 
. : . : . : . : . : . :
JMSF042I21+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
JMSF047P05+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
JMFF011D13+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
                      ____________________________________________________________
consensus TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
 
. : . : . : . : . : . :
JMSF042I21+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
JMSF047P05+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
JMFF011D13+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
                      ____________________________________________________________
consensus GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
 
. : . : . : . : . : . :
JMSF042I21+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
JMSF047P05+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
JMFF011D13+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
                      ____________________________________________________________
consensus CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
 
. : . : . : . : . : . :
JMSF042I21+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
JMSF047P05+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
JMFF011D13+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
                      ____________________________________________________________
consensus CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
 
. : . : . : . : . : . :
JMSF042I21+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
JMSF047P05+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
JMFF011D13+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
                      ____________________________________________________________
consensus GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
 
. : . : . : . : . : . :
JMSF042I21+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCC
JMSF047P05+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCC
JMFF011D13+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCCAAATGCGAAATGAAAAGGT
                      ____________________________________________________________
consensus AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCCAAATGCGAAATGAAAAGGT