clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF010N18 | Sequence | 542 | 004491 (9) | ref|NP_001234287.1| | 2e-41 | vacuolar H+-ATPase A2 subunit isoform [Solanum lycopersicum] gb|AAO23981.1| vacu | 773 | 002539 (6) | dbj|BAH20314.1| | 9e-67 | AT1G78900 [Arabidopsis thaliana] |
JMFF017K12 | Sequence | 578 | 004491 (9) | gb|EYU21201.1| | 1e-74 | hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata] | 649 | 002539 (6) | ref|XP_006362109.1| | 2e-47 | PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum] |
JMFF018K21 | Sequence | 556 | 004491 (9) | gb|EYU21201.1| | 1e-69 | hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata] | 757 | 002539 (6) | ref|XP_006362109.1| | 4e-75 | PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum] |
JMFF040C17 | Sequence | 498 | 004491 (9) | ref|NP_001234287.1| | 1e-52 | vacuolar H+-ATPase A2 subunit isoform [Solanum lycopersicum] gb|AAO23981.1| vacu | 679 | 002539 (6) | ref|NP_001234281.1| | 2e-48 | vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu |
JMFS052H06 | Sequence | 626 | 004491 (9) | ref|XP_011072769.1| | 6e-97 | PREDICTED: V-type proton ATPase catalytic subunit A [Sesamum indicum] ref|XP_01 | |||||
JMFS119G04 | Sequence | 626 | 004491 (9) | ref|XP_009608462.1| | 1e-90 | PREDICTED: V-type proton ATPase catalytic subunit A-like [Nicotiana tomentosifo | |||||
JMSF004E23 | Sequence | 349 | 004491 (9) | gb|KDO46834.1| | 6e-71 | hypothetical protein CISIN_1g010179mg [Citrus sinensis] | |||||
JMSF027B02 | Sequence | 621 | 004491 (9) | ref|XP_009608462.1| | 1e-77 | PREDICTED: V-type proton ATPase catalytic subunit A-like [Nicotiana tomentosifo | 731 | 002539 (6) | dbj|BAH20314.1| | 4e-62 | AT1G78900 [Arabidopsis thaliana] |
JMSF050E13 | Sequence | 682 | 004491 (9) | gb|KDO46834.1| | 5e-100 | hypothetical protein CISIN_1g010179mg [Citrus sinensis] | 791 | 002539 (6) | ref|XP_006362109.1| | 1e-75 | PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF050E13+ TCTGGAGG
____________________________________________________________
consensus TCTGGAGG
. : . : . : . : . : . :
JMFS052H06+ CAACATGGTGTTGCATTAAACTGTTTTCAATGACAGTCGCATAGAGGTCCCCACC
JMFS119G04+ TCAATGACAGTCGCATAGAGGTCCCCACC
JMSF050E13+ AAGTGCAACATGGTGTTGCATTAAACTGTTTTCAATGACAGTCGCATAGAGGTCCCCACC
____________________________________________________________
consensus AAGTGCAACATGGTGTTGCATTAAACTGTTTTCAATGACAGTCGCATAGAGGTCCCCACC
. : . : . : . : . : . :
JMFF017K12+ TGAAATTCCCAAAGAATGTCTTTGTC
JMFF018K21+ TGTC
JMSF004E23+ CCCTCACCTATTTTCTTAGGCTGAAATTCCCAAAGTATGTCTTTGTC
JMFS052H06+ TGTCAAGAGGTCTCCCTCACCTATTTTCTTAGGCTGAAATTCCCAAAGAATGTCTTTGTC
JMFS119G04+ TGTCAAGAGGTCTCCCTCACCTATTTTCTTAGGCTGAAATTCCCAAAGAATGTCTTTGTC
JMSF050E13+ TGTCAAGAGGTCTCCCTCACCTATTTTCTTAGGCTGAAATTCCCAAAGAATGTCTTTGTC
JMSF027B02+ CTTAGGCTGAAATTCCCAAAGAATGTCTTTGTC
____________________________________________________________
consensus TGTCAAGAGGTCTCCCTCACCTATTTTCTTAGGCTGAAATTCCCAAAGAATGTCTTTGTC
. : . : . : . : . : . :
JMFF017K12+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
JMFF018K21+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
JMSF004E23+ AAGTGCCGGAACAGATACACCACGGGGAATATAAACATCACCAGACTTTATTGCAATTGT
JMFS052H06+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
JMFS119G04+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
JMSF050E13+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
JMSF027B02+ AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
____________________________________________________________
consensus AAGGGCTGGAACAGATACACCACGGGGAATGTAGACATCACCAGATTTTATAGCAATTGT
. : . : . : . : . : . :
JMFF017K12+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMFF018K21+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMSF004E23+ CTTCAACGGTCTCTGAATGCCATCAAAGATGTTCCCCAAAATACCAGGGCCCAGCTCCAC
JMFS052H06+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMFS119G04+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMSF050E13+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMFF040C17+ CCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMSF027B02+ CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
JMFF010N18+ AC
____________________________________________________________
consensus CTTCAATGGCCTCTGAATACCATCAAATATGTTCCCCAATATTCCAGGACCAAGCTCCAC
. : . : . : . : . : . :
JMFF017K12+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTANCCATCAGGCCAGCTGTTTCTTC
JMFF018K21+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMSF004E23+ TGACAAAGGCTTGCGTGTACGTAGAACAGGATCATTAACCATCAGCCCAGCTGTTTCTTC
JMFS052H06+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMFS119G04+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMSF050E13+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMFF040C17+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMSF027B02+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
JMFF010N18+ TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
____________________________________________________________
consensus TGACAAAGGCTTACGAGTACGAAGAACAGGATCATTAACCATCAGGCCAGCTGTTTCTTC
. : . : . : . : . : . :
JMFF017K12+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMFF018K21+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMSF004E23+ ATAGACCTGAATTGTAGCTGAATCCCCTTCCAATCGAATGATTTCACCAATGAGATTGTC
JMFS052H06+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMFS119G04+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMSF050E13+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMFF040C17+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMSF027B02+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
JMFF010N18+ ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
____________________________________________________________
consensus ATAAACCTGAATTGTAGCGGAATCTCCTTCCAGCCGAATGATCTCCCCGATAAGGTTGTC
. : . : . : . : . : . :
JMFF017K12+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMFF018K21+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMSF004E23+ ATGTCCGACACGGACAAGTTCATACATGGCAGCACCAGCCATTCCATCA
JMFS052H06+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMFS119G04+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMSF050E13+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMFF040C17+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMSF027B02+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
JMFF010N18+ ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
____________________________________________________________
consensus ATGTCCAACACGAACCAATTCATACATGGCAGCCCCGGCCATTCCATCGGCAACAACAAC
. : . : . : . : . : . :
JMFF017K12+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMFF018K21+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMFS052H06+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMFS119G04+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMSF050E13+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMFF040C17+ TGGACCAGATACCTTGCGGACGCATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMSF027B02+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
JMFF010N18+ TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
____________________________________________________________
consensus TGGACCAGATACCTTGCGGACGTATCCGTACTCGCTTTCCTTTTCGGAATCCTCGAAAGT
. : . : . : . : . : . :
JMFF017K12+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMFF018K21+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMFS052H06+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMFS119G04+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMSF050E13+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMFF040C17+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMSF027B02+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
JMFF010N18+ AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
____________________________________________________________
consensus AGTCAGCGGACCTCCGAACAACGACGGCATTGTGACGAAAGATAACCGTAATCGAATTGC
. : . : . : . : . : . :
JMFF017K12+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMFF018K21+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMFS052H06+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMFS119G04+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMSF050E13+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMFF040C17+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMSF027B02+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
JMFF010N18+ TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
____________________________________________________________
consensus TTAAAGTAAAACCTCACAATTCCGTGATCCGCCGGAAGGAGAAGGCCTGCCGATCAATAT
. : . : . : . : . : . :
JMFF017K12+ CCTGATAA
JMFF018K21+ CCTGATAA
JMFS052H06+ CCTGATAACTGCGAATTTAGATTTAGATTCA
JMFS119G04+ CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTG
JMSF050E13+ CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTGTCAGAG
JMFF040C17+ CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTGTCAGAG
JMSF027B02+ CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTGTCAGAG
JMFF010N18+ CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTGTCAGAG
____________________________________________________________
consensus CCTGATAACTGCGAATTTAGATTTAGATTCAGATGGTCGACTGTGTGCGAAGTGTCAGAG
. : . : . : . : . : . :
JMSF050E13+ AGAGGTTGTAAAT
JMFF040C17+ AGAGGTTGTAAATGATTATATGAAGAC
JMSF027B02+ AGAGGTTGTAAATGATTATATGAAGACGAAGCTGAGCAGTGAGAGAT
JMFF010N18+ AGAGGTTGTAAATGATTATATGAAGACGAAGCTGAGCAGTGAGAGATATAGCACCTTTTA
____________________________________________________________
consensus AGAGGTTGTAAATGATTATATGAAGACGAAGCTGAGCAGTGAGAGATATAGCACCTTTTA
. : . : . : . : . : . :
JMFF010N18+ ACCGATGTCCTGTCTTGAAGGCACGGATTTGGACATACAAAACAATATCATGGGAAAATC
____________________________________________________________
consensus ACCGATGTCCTGTCTTGAAGGCACGGATTTGGACATACAAAACAATATCATGGGAAAATC