Contig 004486:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H01Sequence495004486 (7)gb|KDO78340.1|1e-12hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti507013599 (7)
JMFF010D16Sequence492004486 (7)gb|KDO78340.1|2e-12hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti750013599 (7)gb|ABK96436.1|9e-82unknown [Populus trichocarpa x Populus deltoides]
JMFS089H10Sequence619004486 (7)ref|XP_011086200.1|1e-49PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu
JMFS144D02Sequence626004486 (7)ref|XP_011086200.1|9e-48PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu
JMFS149D12Sequence580004486 (7)ref|XP_011086200.1|1e-51PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu
JMSF009F21Sequence409004486 (7)690013599 (7)ref|XP_007141612.1|1e-65hypothetical protein PHAVU_008G210700g [Phaseolus vulgaris] gb|ESW13606.1| hypot
JMSF011A23Sequence275004486 (7)679013599 (7)gb|ABK96436.1|1e-75unknown [Populus trichocarpa x Populus deltoides]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS149D12+ ACCATGAGAGCAA
JMFS089H10+ GAGAGCAA
                      ____________________________________________________________
consensus ACCATGAGAGCAA
 
. : . : . : . : . : . :
JMFS149D12+ TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
JMFS089H10+ TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
JMFS144D02+ AGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
                      ____________________________________________________________
consensus TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
 
. : . : . : . : . : . :
JMFS149D12+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
JMFS089H10+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
JMFS144D02+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
                      ____________________________________________________________
consensus AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
 
. : . : . : . : . : . :
JMFS149D12+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFS089H10+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFS144D02+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFF003H01+ TAACAACGCCCCAGA
JMFF010D16+ CAACGCCCCAGA
                      ____________________________________________________________
consensus CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
 
. : . : . : . : . : . :
JMFS149D12+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFS089H10+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFS144D02+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFF003H01+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFF010D16+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
                      ____________________________________________________________
consensus GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
 
. : . : . : . : . : . :
JMFS149D12+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFS089H10+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFS144D02+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFF003H01+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMSF009F21+ AGGCGTATAATTGCGAATGCACCAAGGAATATAAGCGCAGTAAGAATGTT
JMFF010D16+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
                      ____________________________________________________________
consensus AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
 
. : . : . : . : . : . :
JMFS149D12+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMSF011A23+ TCACTGCGA
JMFS089H10+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFS144D02+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFF003H01+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMSF009F21+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFF010D16+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
                      ____________________________________________________________
consensus AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
 
. : . : . : . : . : . :
JMFS149D12+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMSF011A23+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFS089H10+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFS144D02+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFF003H01+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMSF009F21+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFF010D16+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
                      ____________________________________________________________
consensus AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
 
. : . : . : . : . : . :
JMFS149D12+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMSF011A23+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFS089H10+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFS144D02+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFF003H01+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMSF009F21+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFF010D16+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
                      ____________________________________________________________
consensus AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
 
. : . : . : . : . : . :
JMFS149D12+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMSF011A23+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFS089H10+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFS144D02+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFF003H01+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMSF009F21+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFF010D16+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
                      ____________________________________________________________
consensus AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
 
. : . : . : . : . : . :
JMFS149D12+ TCAGCAAAGGAGAAAAAGGAGAAGAAA
JMSF011A23+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFS089H10+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFS144D02+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFF003H01+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMSF009F21+ TCAGCAAAAGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFF010D16+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
                      ____________________________________________________________
consensus TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
 
. : . : . : . : . : . :
JMSF011A23+ AGAAC
JMFS089H10+ AGAACATGGGG
JMFS144D02+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTT
JMFF003H01+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCAC
JMSF009F21+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCAC
JMFF010D16+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCACAT
                      ____________________________________________________________
consensus AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCACAT