Contig 004479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B21Sequence478004479 (2)ref|XP_006426527.1|4e-45hypothetical protein CICLE_v10025421mg [Citrus clementina] gb|ESR39767.1| hypoth696013678 (2)gb|AAG51573.1|AC027034_191e-60RNA helicase, 5' partial; 101954-101280 [Arabidopsis thaliana]
JMFF017A17Sequence478004479 (2)ref|XP_006426527.1|4e-46hypothetical protein CICLE_v10025421mg [Citrus clementina] gb|ESR39767.1| hypoth819013678 (2)gb|EPS60527.1|5e-87hypothetical protein M569_14276, partial [Genlisea aurea]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017A17+ TTGAATAGGTGTAGGCTCAGTAAAGCCAGCCTTCTCAATTTCTTTCATAACATATTCT
JMFF009B21+ TTGAATAGGTGTAGGCTCAGTAAAGCCAGCCTTCTCAATTTCTTTCATAACATATTCT
                      ____________________________________________________________
consensus TTGAATAGGTGTAGGCTCAGTAAAGCCAGCCTTCTCAATTTCTTTCATAACATATTCT
 
. : . : . : . : . : . :
JMFF017A17+ GGAAACCCCACGTCACTGAAGCTCTTCACAGGCTTCGGCACATCACGGCCTTCTACCGTT
JMFF009B21+ GGAAACCCCACGTCACTGAAGCTCTTCACAGGCTTCGGCACATCACGGCCTTCTACCGTT
                      ____________________________________________________________
consensus GGAAACCCCACGTCACTGAAGCTCTTCACAGGCTTCGGCACATCACGGCCTTCTACCGTT
 
. : . : . : . : . : . :
JMFF017A17+ ATCTCCCGTCGCAGCCTATATTCCTCCACCTCGCTGTCCGTCATTGCCGCAACTGACCGT
JMFF009B21+ ATCTCCCGTCGCAGCCTATATTCCTCCACCTCGCTGTCCGTCATTGCCGCAACTGACCGT
                      ____________________________________________________________
consensus ATCTCCCGTCGCAGCCTATATTCCTCCACCTCGCTGTCCGTCATTGCCGCAACTGACCGT
 
. : . : . : . : . : . :
JMFF017A17+ GACTCGACATAGAAATTCTTCTCAAACGGGGTCAACCCGTCTAAATCCAATTTCCGAGGC
JMFF009B21+ GACTCGACATAGAAATTCTTCTCAAACGGGGTCAACCCGTCTAAATCCAATTTCCGAGGC
                      ____________________________________________________________
consensus GACTCGACATAGAAATTCTTCTCAAACGGGGTCAACCCGTCTAAATCCAATTTCCGAGGC
 
. : . : . : . : . : . :
JMFF017A17+ GACTCACTGCCCTCATAGTCTTTCCTACTTGCTGAAGATGACCGGTATGTCGATCCACCG
JMFF009B21+ GACTCACTGCCCTCATAGTCTTTCCTACTTGCTGAAGATGACCGGTATGTCGATCCACCG
                      ____________________________________________________________
consensus GACTCACTGCCCTCATAGTCTTTCCTACTTGCTGAAGATGACCGGTATGTCGATCCACCG
 
. : . : . : . : . : . :
JMFF017A17+ CCAAAGCCAGAGTCGCTTCGTCGGTCTCGATACGACCCGGGGTCCGCCGCGCGGCTATCG
JMFF009B21+ CCAAAGCCAGAGTCGCTTCGTCGGTCTCGATACGACCCGGGGTCCGCCGCGCGGCTATCG
                      ____________________________________________________________
consensus CCAAAGCCAGAGTCGCTTCGTCGGTCTCGATACGACCCGGGGTCCGCCGCGCGGCTATCG
 
. : . : . : . : . : . :
JMFF017A17+ TATCTACTCATTGAACGTATTGTTGACTGCAAGCTCTGGAGAAGTTCCGGCGAGGGATAT
JMFF009B21+ TAGCTACTCATTGAACGTATTGTTGACTGCAAGCTCTGGAGAAGTTCCGGCGAGGGATAT
                      ____________________________________________________________
consensus TATCTACTCATTGAACGTATTGTTGACTGCAAGCTCTGGAGAAGTTCCGGCGAGGGATAT
 
. : . : . : . : . : . :
JMFF017A17+ CGATGGTTTAAAGAGATGGCTCTTTTAATCCGTGTACTACGGTCGCCCCGGCAGTGAGCT
JMFF009B21+ CGATGGTTTAAAGAGATGGCTCTTTTAATCCGTGTACTACGGTCGCCCCGGCAGTGAGCT
                      ____________________________________________________________
consensus CGATGGTTTAAAGAGATGGCTCTTTTAATCCGTGTACTACGGTCGCCCCGGCAGTGAGCT