clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002N13 | Sequence | 571 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 691 | 012282 (9) | ref|XP_009802382.1| | 5e-94 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF007C03 | Sequence | 535 | 004470 (9) | ref|XP_009802382.1| | 1e-58 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 778 | 012282 (9) | ref|XP_009802382.1| | 5e-83 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF017H08 | Sequence | 556 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 711 | 012282 (9) | ref|XP_009802382.1| | 3e-84 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF023O15 | Sequence | 539 | 004470 (9) | ref|XP_009802382.1| | 5e-79 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 666 | 012282 (9) | ref|XP_009802382.1| | 1e-81 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF028N19 | Sequence | 564 | 004470 (9) | ref|XP_009802382.1| | 6e-76 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 658 | 012282 (9) | ref|XP_009802382.1| | 9e-84 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF033H03 | Sequence | 559 | 004470 (9) | ref|XP_009802382.1| | 3e-77 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 754 | 012282 (9) | ref|XP_009802382.1| | 7e-96 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMFF038I22 | Sequence | 137 | 004470 (9) | ||||||||
JMSF009E16 | Sequence | 252 | 004470 (9) | ref|XP_009802382.1| | 4e-10 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 774 | 012282 (9) | ref|XP_009802382.1| | 1e-90 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
JMSF021G21 | Sequence | 606 | 004470 (9) | ref|XP_009802382.1| | 8e-104 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] | 752 | 012282 (9) | ref|XP_009802382.1| | 1e-92 | PREDICTED: serine carboxypeptidase-like 27 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF021G21+ TCGTACACGAGCTGA
____________________________________________________________
consensus TCGTACACGAGCTGA
. : . : . : . : . : . :
JMSF021G21+ GATAACTGTGGAACATAATGCCCCGCATAACTTTCTCCCATGATGTAGAAATCTCTGTGG
____________________________________________________________
consensus GATAACTGTGGAACATAATGCCCCGCATAACTTTCTCCCATGATGTAGAAATCTCTGTGG
. : . : . : . : . : . :
JMSF021G21+ TTGTATTGAGGAAACCTCTCAAACCACTTGACAAGAAATGTGTATGCATCTTCAGCTGTT
JMFF023O15+ ACAAGAAATGTGTATGCATCTTCAGCTGTT
JMFF017H08+ ACAAGAAATGTGTATGCATCTTCAGCTGTT
JMFF033H03+ ACAAGAAATGTGTATGCATCTTCAGCTGTT
JMFF028N19+ AATGTGTATGCATCTTCAGCTGTT
JMFF002N13+ ACAAGAAATGTGTATGCATCTTCAGCTGTT
____________________________________________________________
consensus TTGTATTGAGGAAACCTCTCAAACCACTTGACAAGAAATGTGTATGCATCTTCAGCTGTT
. : . : . : . : . : . :
JMSF021G21+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAAGAGTAACCAACACCA
JMFF023O15+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
JMFF017H08+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
JMFF033H03+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
JMFF028N19+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
JMFF002N13+ CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
____________________________________________________________
consensus CTGTTGTCGCCTGCAGTTTTCAAATCCGAGGTTGTATTTGAGTAGGAGTAACCAACACCA
. : . : . : . : . : . :
JMSF021G21+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF023O15+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF017H08+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF033H03+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF028N19+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF002N13+ GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
JMFF007C03+ TGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
____________________________________________________________
consensus GCCGGTGAATCAAGAAACAGCAAATTCGCCACGTTATTCCAAGAATAAGGATTAAGGTAA
. : . : . : . : . : . :
JMSF021G21+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF023O15+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF017H08+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF033H03+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF028N19+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF002N13+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
JMFF007C03+ AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
____________________________________________________________
consensus AGAGTTTTGCCGTCAGGGTTGATGTGAAATGGGCCAATCTCTTCAGCAGCTCCATAGCCT
. : . : . : . : . : . :
JMSF021G21+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF023O15+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF017H08+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF033H03+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF028N19+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF002N13+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
JMFF007C03+ ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
____________________________________________________________
consensus ACAGAGGAGCAGCCAGGCCCTCCATTCAGCCACAAAATGAGTGGCTTTTCCACGGGGTTT
. : . : . : . : . : . :
JMSF021G21+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMFF023O15+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMFF017H08+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMFF033H03+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMFF028N19+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMFF002N13+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
JMSF009E16+ CATTCACG
JMFF007C03+ TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
____________________________________________________________
consensus TGACTCGCCGGCGACTCAGTCAGCCAGTAAAACAGTGCCCTCCCGGCGGTCTCATTCACG
. : . : . : . : . : . :
JMSF021G21+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF023O15+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF017H08+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF033H03+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF028N19+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF002N13+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMSF009E16+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
JMFF007C03+ GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
____________________________________________________________
consensus GTCACGTAACCGGAGAACTGACTGAACTCGGCGTTGAGTGGCTGCCCGGGCAAATACGTT
. : . : . : . : . : . :
JMSF021G21+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF023O15+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF017H08+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF038I22+ GGAGGAATTACAACAACCCAGAACAAGA
JMFF033H03+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF028N19+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF002N13+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMSF009E16+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
JMFF007C03+ ATCCTATCTCTCTCTTGATCTGAAGTTGTTTCGGAGGAATTACAACAACCCAGAACAAGA
____________________________________________________________
consensus ATCCTATCTCTCTCTTGATCTGAAGTTGTTTTGGAGGAATTACAACAACCCAGAACAAGA
. : . : . : . : . : . :
JMSF021G21+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTC
JMFF023O15+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMFF017H08+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMFF038I22+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCNTCATTGAATATCTC
JMFF033H03+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMFF028N19+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMFF002N13+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMSF009E16+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
JMFF007C03+ AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
____________________________________________________________
consensus AATGCCCAGCATAGTACTGCCGGCAACAGTGACTGCAATGGCCGCCTCATTGAATATCTC
. : . : . : . : . : . :
JMFF023O15+ TCTCTCTCCCTCTCTCTCCCTT
JMFF017H08+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCT
JMFF038I22+ TCTCTCTCCCTCTNTCTCCCTTTCTNTNTTTNTCAGACA
JMFF033H03+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATC
JMFF028N19+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATCTCTTTTTCTTT
JMFF002N13+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATCTCTTTTTCTTT
JMSF009E16+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATCTCTTTTTCTTT
JMFF007C03+ TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATCTCTTTTTCTTT
____________________________________________________________
consensus TCTCTCTCCCTCTCTCTCCCTTTCTTTCTTTCTCAGACAACACCCTATCTCTTTTTCTTT
. : . : . : . : . : . :
JMFF007C03+ CTCAGACAACACCGAAACAACAGAATTTAGACCCAGTTTTTTTTAGCGCACATGAAACAC
____________________________________________________________
consensus CTCAGACAACACCGAAACAACAGAATTTAGACCCAGTTTTTTTTAGCGCACATGAAACAC