Contig 004462:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A11Sequence595004462 (6)gb|AAF86340.1|AF277455_19e-73UMP synthase [Nicotiana plumbaginifolia]785001050 (6)gb|AAF86340.1|AF277455_13e-129UMP synthase [Nicotiana plumbaginifolia]
JMFF009D11Sequence552004462 (6)ref|XP_006362855.1|4e-84PREDICTED: uridine 5'-monophosphate synthase-like [Solanum tuberosum]743001050 (6)gb|AAF86340.1|AF277455_13e-119UMP synthase [Nicotiana plumbaginifolia]
JMFF015H15Sequence548004462 (6)ref|XP_006362855.1|3e-82PREDICTED: uridine 5'-monophosphate synthase-like [Solanum tuberosum]641001050 (6)ref|XP_011091831.1|1e-93PREDICTED: uridine 5'-monophosphate synthase [Sesamum indicum]
JMSF021A14Sequence676004462 (6)ref|XP_006362855.1|2e-100PREDICTED: uridine 5'-monophosphate synthase-like [Solanum tuberosum]806001050 (6)ref|XP_009606895.1|6e-138PREDICTED: uridine 5'-monophosphate synthase [Nicotiana tomentosiformis]
JMSF033A14Sequence635004462 (6)ref|XP_006362855.1|8e-103PREDICTED: uridine 5'-monophosphate synthase-like [Solanum tuberosum]728001050 (6)ref|XP_011091831.1|4e-90PREDICTED: uridine 5'-monophosphate synthase [Sesamum indicum]
JMSF038A21Sequence685004462 (6)gb|AAF86340.1|AF277455_11e-96UMP synthase [Nicotiana plumbaginifolia]875001050 (6)ref|XP_009606895.1|9e-153PREDICTED: uridine 5'-monophosphate synthase [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033A14+ CCTTCAATATCCTCACCATCTCAGTCAACTTCACCATGGCGTGCAGCCTAATTCCATTCT
JMSF021A14+ TCCTCACCATCTCAGTCAACTTCACCATGGCGTGCAGCCTAATTCCATTCT
JMSF038A21+ TCAGTCAACTTCACCATGGCGTGCAGCCTAATTCCATTCT
                      ____________________________________________________________
consensus CCTTCAATATCCTCACCATCTCAGTCAACTTCACCATGGCGTGCAGCCTAATTCCATTCT
 
. : . : . : . : . : . :
JMSF033A14+ CAGCCAAATTCTCCCTACCTCCTTGTTCCCTGTCAATCATGACGACGGCGTCGGTAACCT
JMFF015H15+ TCCCTGTCAATCATGACGACGGCGTCGGTAACCT
JMFF009D11+ TTGTTCCCTGTCAATCATGACGACGGCGTCGGTAACCT
JMSF021A14+ CAGCCAAATTCTCCCTACCTCCTTGTTCCCTGTCAATCATGACGACGGCGTCGGTAACCT
JMSF038A21+ CAGCCAAATTCTCCCTACCTCCTTGTTCCCTGTCAATCATGACGACGGCGTCGGTAACCT
                      ____________________________________________________________
consensus CAGCCAAATTCTCCCTACCTCCTTGTTCCCTGTCAATCATGACGACGGCGTCGGTAACCT
 
. : . : . : . : . : . :
JMSF033A14+ TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
JMFF015H15+ TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
JMFF009D11+ TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
JMSF021A14+ TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
JMSF038A21+ TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
JMFF006A11+ CCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
                      ____________________________________________________________
consensus TGAGGCCAGCGGCGCGGAGAGGTGCGGCGGTCTCGAGAACGGAGGCGCCGCTGGTGACGA
 
. : . : . : . : . : . :
JMSF033A14+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
JMFF015H15+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
JMFF009D11+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
JMSF021A14+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
JMSF038A21+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTNGGCGG
JMFF006A11+ GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
                      ____________________________________________________________
consensus GGTCCTCGATGATGAGGCAGACCTGGCCGGAGCTGAAGGCTCCCTCAATGGCCTTGGCGG
 
. : . : . : . : . : . :
JMSF033A14+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
JMFF015H15+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
JMFF009D11+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
JMSF021A14+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
JMSF038A21+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
JMFF006A11+ TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
                      ____________________________________________________________
consensus TGCCGTAGTCCTTGACCTCCTTACGGCGCATGAGCATAGGAACATTGTTCGCGGTGGAAA
 
. : . : . : . : . : . :
JMSF033A14+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
JMFF015H15+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
JMFF009D11+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
JMSF021A14+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
JMSF038A21+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
JMFF006A11+ TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
                      ____________________________________________________________
consensus TACAGGTGGCGATGGGAAGGGCGGTGTAGGGAACGCCGCAGACGAGGTCATAGGCGGAGG
 
. : . : . : . : . : . :
JMSF033A14+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
JMFF015H15+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
JMFF009D11+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
JMSF021A14+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
JMSF038A21+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
JMFF006A11+ CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
                      ____________________________________________________________
consensus CGGAGGGAGGGATGATGGCGGTGAGCGTCTCGGAAATCTGGCGGAGGAGCGAAGGATACG
 
. : . : . : . : . : . :
JMSF033A14+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
JMFF015H15+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
JMFF009D11+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
JMSF021A14+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
JMSF038A21+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
JMFF006A11+ AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
                      ____________________________________________________________
consensus AGACGATGAGGCGGAGGTCGATGTAGATGGGGGAAAGGATGCCGGATTTGAGCTTGAACT
 
. : . : . : . : . : . :
JMSF033A14+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
JMFF015H15+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
JMFF009D11+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
JMSF021A14+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
JMSF038A21+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
JMFF006A11+ CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
                      ____________________________________________________________
consensus CGCCGAACTTGACGGCGGAGATGTCGTGGAGCTGGAGGATCAGAGACTCCATAGCCTGTG
 
. : . : . : . : . : . :
JMSF033A14+ CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
JMFF015H15+ CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
JMFF009D11+ CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
JMSF021A14+ CGGAAACTGATGATGGAAACGACGCCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
JMSF038A21+ CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
JMFF006A11+ CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
                      ____________________________________________________________
consensus CGGAAACTGATGATGGAAACGACGTCATCTCTTCTTCTCCTTCCTCACCTTCACAGCTTA
 
. : . : . : . : . : . :
JMSF033A14+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAG
JMFF015H15+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAGT
JMFF009D11+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAGT
JMSF021A14+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAGTGAGAGAAGCGGCGACTGTGCTTTTGC
JMSF038A21+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAGTGAGAGAAGCGGCGACTGTGCTTTTGC
JMFF006A11+ AGCACAGAGAGTGAACAACAGGTGCAGTTATAGTGAGAGAAGCGGCGACTGTGCTTTTGC
                      ____________________________________________________________
consensus AGCACAGAGAGTGAACAACAGGTGCAGTTATAGTGAGAGAAGCGGCGACTGTGCTTTTGC
 
. : . : . : . : . : . :
JMSF021A14+ TTTTGTAGTAGCAGTGCGGCGGAC
JMSF038A21+ TTTTGTAGTAGCAGTGCGGCGGACATTAAAAGAGAACCTAAACT
JMFF006A11+ TTTTGTAGTAGCAGTGCGGCGGACATTAAAAGAGAACCTAAACTAAGGAGAAAAAAGATT
                      ____________________________________________________________
consensus TTTTGTAGTAGCAGTGCGGCGGACATTAAAAGAGAACCTAAACTAAGGAGAAAAAAGATT