| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K18 | Sequence | 499 | 004457 (4) | ref|XP_009588520.1| | 4e-07 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 754 | 002663 (4) | ref|XP_009789263.1| | 2e-18 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana sylvestris] |
| JMFF015C19 | Sequence | 516 | 004457 (4) | ref|XP_009588520.1| | 4e-05 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 665 | 002663 (4) | ref|XP_004235179.1| | 2e-07 | PREDICTED: putative kinase-like protein TMKL1 [Solanum lycopersicum] |
| JMFF016I02 | Sequence | 464 | 004457 (4) | ref|XP_009588520.1| | 2e-04 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 756 | 002663 (4) | ref|XP_009789263.1| | 2e-18 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana sylvestris] |
| JMFF041M12 | Sequence | 594 | 004457 (4) | ref|XP_009588520.1| | 3e-24 | PREDICTED: putative kinase-like protein TMKL1 [Nicotiana tomentosiformis] | 593 | 002663 (4) | |||
This contig is upended
. : . : . : . : . : . :
JMFF041M12+ GCAGCCCTATACAAAGTCCCATACCCAGATTTCCCTATCACCTCCCCAGNAGCATC
____________________________________________________________
consensus GCAGCCCTATACAAAGTCCCATACCCAGATTTCCCTATCACCTCCCCAGNAGCATC
. : . : . : . : . : . :
JMFF041M12+ AAGNATATCNAGCACAGTCAGATCTTCCCCACCCTCAAACCTCATCAAAATCTCCTTACC
JMFF015C19+ TTCCCCACCCTCAAACCTCATCAAAATCTCCTTACC
JMFF004K18+ CTCATCAAAATCTCCTTACC
____________________________________________________________
consensus AAGNATATCNAGCACAGTCAGATCTTCCCCACCCTCAAACCTCATCAAAATCTCCTTACC
. : . : . : . : . : . :
JMFF041M12+ CACCA-CCCCATCTCTTTCCTTAACCTCAAAACCACCTTCTACATCCCTTGGAACATCCT
JMFF015C19+ CACCACCCCCATCTCTTTCCTTAACCTCAAAACCACCTTCTACATCCCTTGGAACATCCT
JMFF016I02+ TTCCTTAACCTCAAAACCACCTTCTACATCCCTTGGAACATCCT
JMFF004K18+ CACCA-CCCCATCTCTTTCCTTAACCTCAAAACCACCTTCTACATCCCTTGGAACATCCT
____________________________________________________________
consensus CACCA-CCCCATCTCTTTCCTTAACCTCAAAACCACCTTCTACATCCCTTGGAACATCCT
. : . : . : . : . : . :
JMFF041M12+ CAGCTCCCCTCCTCCGACAGTAACACCACATGTAAACCGCCAAAGCTGCAACACAAAACG
JMFF015C19+ CAGCTCCCCTCCTCCGACAGTAACACCACATGTAAACCGCCAAAGCTGCAACACAAAACG
JMFF016I02+ CAGCTCCCCTCCTCCGACAGTAACACCACATGTAAACCGCCAAAGCTGCAACACAAAACG
JMFF004K18+ CAGCTCCCCTCCTCCGACAGTAACACCACATGTAAACCGCCAAAGCTGCAACACAAAACG
____________________________________________________________
consensus CAGCTCCCCTCCTCCGACAGTAACACCACATGTAAACCGCCAAAGCTGCAACACAAAACG
. : . : . : . : . : . :
JMFF041M12+ AGGTCAGTCCTATGATTAGAATCACCAAATGCGTGTGCTCCATTTTTCATGTGTCTTCCT
JMFF015C19+ AGGTCAGTCCTATGATTAGAATCACCAAATGCGTGTGCTCCATTTTTCATGTGTCTTCCT
JMFF016I02+ AGGTCAGTCCTATGATTAGAATCACCAAATGCGTGTGCTCCATTTTTCATGTGTCTTCCT
JMFF004K18+ AGGTCAGTCCTATGATTAGAATCACCAAATGCGTGTGCTCCATTTTTCATGTGTCTTCCT
____________________________________________________________
consensus AGGTCAGTCCTATGATTAGAATCACCAAATGCGTGTGCTCCATTTTTCATGTGTCTTCCT
. : . : . : . : . : . :
JMFF041M12+ AGTAAAGCTCCAATCTTTACACGAGTTCTGAGCTGAAACCGAGGATCCAAATCTGGGTAT
JMFF015C19+ AGTAAAGCTCCAATCTTTACACGAGTTCTGAGCTGAAACCGAGGATCCAAATCTGGGTAT
JMFF016I02+ AGTAAAGCTCCAATCTTTACACGAGTTCTGAGCTGAAACCGAGGATCCAAATCTGGGTAT
JMFF004K18+ AGTAAAGCTCCAATCTTTACACGAGTTCTGAGCTGAAACCGAGGATCCAAATCTGGGTAT
____________________________________________________________
consensus AGTAAAGCTCCAATCTTTACACGAGTTCTGAGCTGAAACCGAGGATCCAAATCTGGGTAT
. : . : . : . : . : . :
JMFF041M12+ TGTTCAAGAATGCGAAGCTGAACTGGAAATGTGACCAAATGGGTTCAATGTTTCCGGGCT
JMFF015C19+ TGTTCAAGAATGCGAAGCTGAACTGGAAATGTGACCAAATGGGTTCAATGTTTCCGGGCT
JMFF016I02+ TGTTCAAGAATGCGAAGCTGAACTGGAAATGTGACCAAATGGGTTCAATGTTTCCGGGTT
JMFF004K18+ TGTTCAAGAATGCGAAGCTGAACTGGAAATGTGACCAAATGGGTTCAATGTTTCCGGGTT
____________________________________________________________
consensus TGTTCAAGAATGCGAAGCTGAACTGGAAATGTGACCAAATGGGTTCAATGTTTCCGGGTT
. : . : . : . : . : . :
JMFF041M12+ AAAGAGATTTCTGGGGGAACCCTGTCAAGGGATTTCTGAAACCATTCTAAAAGCAAAATC
JMFF015C19+ AAAGAGATTTCTGGGGGAACCCTGTCAAGGGATTTCTGAAACCATTCTAAAAGCAAAATC
JMFF016I02+ AAAGAGATTTCTGGGGGAACCCTGTCAAGGGATTTCTGAAACCATTCTAAAAGCAAAATC
JMFF004K18+ AAAGAGATTTCTGGGGGAACCCTGTCAAGGGATTTCTGAAACCATTCTAAAAGCAAAATC
____________________________________________________________
consensus AAAGAGATTTCTGGGGGAACCCTGTCAAGGGATTTCTGAAACCATTCTAAAAGCAAAATC
. : . : . : . : . : . :
JMFF041M12+ TAAAGAGAGTTGGTGGGAGATGAAATGGTGGAAGATGGCTTTTGTTTGGAAGCAAGGAAA
JMFF015C19+ TAAAGAGAGTTGGTGGGAGATGAAATGGTGGAAGATGGCTTTTGTTTGGAAGCAAGGAAA
JMFF016I02+ TAAAGAGAGTTGGTGGGAGATGAAATGGTGGAAGATGGCTTTTGTTTGGAAGCAAGGAAA
JMFF004K18+ TAAAGAGAGTTGGTGGGAGATGAAATGGTGGAAGATGGCTTTTGTTTGGAAGCAAGGAAA
____________________________________________________________
consensus TAAAGAGAGTTGGTGGGAGATGAAATGGTGGAAGATGGCTTTTGTTTGGAAGCAAGGAAA
. : . : . : . : . : . :
JMFF041M12+ TGGAGCAAAACTGTAGCGCAGAGAGAGACAGAGAGAAGACGTTGGCCAGT
JMFF015C19+ TGGAGCAAAACTGTAGCGCAGAGAGAGACAGAGAGAAGACGTTGGCCAGT
JMFF016I02+ TGGAGCAAAACTGTAGCGCAGAGAGAGACAGAGAGAAGACGTTGGCCAGT
JMFF004K18+ TGGAGCAAAACTGTAGCGCAGAGAGAGACAGAGAGAAGACGTTGGCCAGTTGGGAAAGTT
____________________________________________________________
consensus TGGAGCAAAACTGTAGCGCAGAGAGAGACAGAGAGAAGACGTTGGCCAGTTGGGAAAGTT