| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003L23 | Sequence | 511 | 004451 (5) | ref|XP_010326426.1| | 3e-54 | PREDICTED: putative uridine kinase C227.14 isoform X2 [Solanum lycopersicum] | |||||
| JMSF010E03 | Sequence | 397 | 004451 (5) | ref|XP_010326426.1| | 5e-31 | PREDICTED: putative uridine kinase C227.14 isoform X2 [Solanum lycopersicum] | 739 | 004451 (5) | ref|XP_009589138.1| | 1e-122 | PREDICTED: putative uridine kinase C227.14 isoform X1 [Nicotiana tomentosiformi |
| JMSF048J07 | Sequence | 697 | 004451 (5) | ref|XP_010326426.1| | 5e-101 | PREDICTED: putative uridine kinase C227.14 isoform X2 [Solanum lycopersicum] | 759 | 004451 (5) | ref|XP_009589138.1| | 2e-120 | PREDICTED: putative uridine kinase C227.14 isoform X1 [Nicotiana tomentosiformi |
This contig is upended
. : . : . : . : . : . :
rJMSF010E03- CAATGAAGATTATTGCTGGTGACAG
rJMSF048J07- TATTGCTGGTGACAG
____________________________________________________________
consensus CAATGAAGATTATTGCTGGTGACAG
. : . : . : . : . : . :
rJMSF010E03- ATCATGCACTGGTTTTCAACCATAGCAGTTATTTTATCCAGATGTTTCCTCATACGAAAC
rJMSF048J07- ATCATGCACTGGTTTTCAACCATAGCAGTTATTTTATCCAGATGTTTCCTCATACGAAAC
____________________________________________________________
consensus ATCATGCACTGGTTTTCAACCATAGCAGTTATTTTATCCAGATGTTTCCTCATACGAAAC
. : . : . : . : . : . :
rJMSF010E03- AAAAAAGGTAAGCGATGAAAGCTAGAGTTTTCGGGCTTTAGGGATTCAATCACCTTGAAG
rJMSF048J07- AAAAAAGGTAAGCGATGAAAGCTAGAGTTTTCGGGCTTTAGGGATTCAATCACCTTGAAG
____________________________________________________________
consensus AAAAAAGGTAAGCGATGAAAGCTAGAGTTTTCGGGCTTTAGGGATTCAATCACCTTGAAG
. : . : . : . : . : . :
rJMSF010E03- AGTCGATTGACTTGATCACCAAATCTGCGTTTTTCTTGGATTTCATGATTAGCTCGGCGT
rJMSF048J07- AGTCGATTGACTTGATCACCAAATCTGCGTTTTTCTTGGATTTCATGATTAGCTCGGCGT
____________________________________________________________
consensus AGTCGATTGACTTGATCACCAAATCTGCGTTTTTCTTGGATTTCATGATTAGCTCGGCGT
. : . : . : . : . : . :
rJMSF010E03- TGGGTCTGTCGTTGTAGTCAATCCGCCATTTAGCAACATCAGGAGGTTTCCCTGTTGCTA
rJMSF048J07- TGGGTCTGTCGTTGTAGTCAATCCGCCATTTAGCAACATCAGGAGGTTTCCCTGTTGCTA
____________________________________________________________
consensus TGGGTCTGTCGTTGTAGTCAATCCGCCATTTAGCAACATCAGGAGGTTTCCCTGTTGCTA
. : . : . : . : . : . :
rJMSF010E03- TGTGCCTCTTTAAGACTCGTTGCATTGATTTTTCAATGTCAACATCAACAAACCACTTTT
rJMSF048J07- TGTGCCTCTTTAAGACTCGTTGCATTGATTTTTCAATGTCAACATCAACAAACCACTTTT
____________________________________________________________
consensus TGTGCCTCTTTAAGACTCGTTGCATTGATTTTTCAATGTCAACATCAACAAACCACTTTT
. : . : . : . : . : . :
rJMSF010E03- CATCAAATATTGATGAAATATCTTTCCAGACACCCTCTTCCAACAACAAATAATTACCTT
rJMSF048J07- CATCAAATATTGATGAAATATCTTTCCAGACACCCTCTTCCAACAACAAATAATTACCTT
____________________________________________________________
consensus CATCAAATATTGATGAAATATCTTTCCAGACACCCTCTTCCAACAACAAATAATTACCTT
. : . : . : . : . : . :
rJMSF010E03- CAACTATCACCACTTTGTGATGAACACTGACAAAGATATCATCTTCCACTGGATCTCCGA
rJMSF048J07- CAACTATCACCACTTTGTGATGAACACTGACAAAGATATCATCTTCCACTGGATCTCCGA
JMSF048J07+ CCACTTTGTGATGAACACTGACAAAGATATCATCTTCCACTGGATCTCCGA
____________________________________________________________
consensus CAACTATCACCACTTTGTGATGAACACTGACAAAGATATCATCTTCCACTGGATCTCCGA
. : . : . : . : . : . :
rJMSF010E03- CACCATGGTCGAATGATGGAGCATATACTGATCCCTGATCTCTCAGAGTTTTTAAACACG
rJMSF048J07- CACCATGGTCGAATGATGGAGCATATACTGATCCCTGATCTCTCAGAGTTTTTAAACACG
JMSF048J07+ CACCATGGTCGAATGATGGAGCATATACTGATCCCTGATCTCTCAGAGTTTTTAAACACG
____________________________________________________________
consensus CACCATGGTCGAATGATGGAGCATATACTGATCCCTGATCTCTCAGAGTTTTTAAACACG
. : . : . : . : . : . :
rJMSF010E03- TTAGCAGTAAGTTGGGATCAAATGTCCATGGAGCTCCCCTTCTGGCATGCGCTTCATCCG
rJMSF048J07- TTAGCAGTAAGTTGGGATCAAATGTCCATGGAGCTCCCCTTCTGGCATGCGCTTCATCCG
JMSF048J07+ TTAGCAGTAAGTTGGGATCAAATGTCCATGGAGCTCCCCTTCTGGCATGCGCTTCATCCG
____________________________________________________________
consensus TTAGCAGTAAGTTGGGATCAAATGTCCATGGAGCTCCCCTTCTGGCATGCGCTTCATCCG
. : . : . : . : . : . :
rJMSF010E03- GATCCTCCATTTCATCAAGCTGGCGGCGATAAAGATGGAATCCATCCATTGGAAGAACAA
rJMSF048J07- GATCCTCCATTTCATCAAGCTGGCGGCGATAAAGATGGAATCCATCCATTGGAAGAACAA
JMSF048J07+ GATCCTCCATTTCATCAAGCTGGCGGCGATAAAGATGGAATCCATCCATTGGAAGAACAA
JMFF003L23+ ATAAAGATGGAATCCATCCATTGGAAGAACAA
____________________________________________________________
consensus GATCCTCCATTTCATCAAGCTGGCGGCGATAAAGATGGAATCCATCCATTGGAAGAACAA
. : . : . : . : . : . :
rJMSF010E03- TAGCAGTTGCAGGTGTTTCCACTTGGGAATCAAAGGAACAAGACTTCTGTGGCCACAACA
rJMSF048J07- TAGCAGTTGCAGGTGTTTCCACTTGGGAATCAAAGGAACAAGACTTCTGTGGCCACAACA
JMSF048J07+ TAGCAGTTGCAGGTGTTTCCACTTGGGAATCAAAGGAACAAGACTTCTGTGGCCACAACA
JMFF003L23+ TAGCAGTTGCAGGTGTTTCCACTTGGGAATCAAAGGAACAAGACTTCTGTGGCCACAACA
____________________________________________________________
consensus TAGCAGTTGCAGGTGTTTCCACTTGGGAATCAAAGGAACAAGACTTCTGTGGCCACAACA
. : . : . : . : . : . :
rJMSF010E03- TATTAACTCTCCGGACAACCTCAGAAGCAAGAGTTGACTTTCC
rJMSF048J07- TATTAACTCTCCGGACAACCTCAGAAGCAAGAGTTGACTTTCCCAGCACCGGGAGGACCA
JMSF010E03+ TCCGGACAACNTCAGAAGCAAGAGTTGACTTT-CCAGCACCGGGAGGACCA
JMSF048J07+ TATTAACTCTCCGGACAACCTCAGAAGCAAGAGTTGACTTT-CCAGCACCGGGAGGACCA
JMFF003L23+ TATTAACTCTCCGGACAACCTCAGAAGCAAGAGTTGACTTT-CCAGCACCGGGAGGACCA
____________________________________________________________
consensus TATTAACTCTCCGGACAACCTCAGAAGCAAGAGTTGACTTT-CCAGCACCGGGAGGACCA
. : . : . : . : . : . :
rJMSF048J07- GCCAAACCAACAATATGCTTTAA
JMSF010E03+ GCCAAACCAACAATATGCTTTAAATTGGGATTTGATGCGGCTGCAGCTGTAGGAACAAGG
JMSF048J07+ GCCAAACCAACAATATGCTTTAAATTGGGATTTGATGCGGCTGCAGCTGTAGGAACAAGG
JMFF003L23+ GCCAAACCAACAATATGCTTTAAATTGGGATTTGATGCGGCTGCAGCTGTAGGAACAAGG
____________________________________________________________
consensus GCCAAACCAACAATATGCTTTAAATTGGGATTTGATGCGGCTGCAGCTGTAGGAACAAGG
. : . : . : . : . : . :
JMSF010E03+ TGCTCTGCCAAGGCATCATATATGTCATCCATGCACTCAGCATCCATGACTGGAATTTGT
JMSF048J07+ TGCTCTGCCAAGGCATCATATATGTCATCCATGCACTCAGCATCCATGACTGGAATTTGT
JMFF003L23+ TGCTCTGCCAAGGCATCATATATGTCATCCATGCACTCAGCATCCATGACTGGAATTTGT
____________________________________________________________
consensus TGCTCTGCCAAGGCATCATATATGTCATCCATGCACTCAGCATCCATGACTGGAATTTGT
. : . : . : . : . : . :
JMSF010E03+ TTCCTTTGGCAACATACCTGCGAATGATTTCCCTTCGGAATTGAAAGTACCGAAGGTCTG
JMSF048J07+ TTCCTTTGGCAACATACCTGCGAATGATTTCCCTTCGGAATTGAAAGTACCGAAGGTCTG
JMFF003L23+ TTCCTTTGGCAACATACCTGCGAATGATTTCCCTTCGGAATTGAAAGTACCGAAGGTCTG
____________________________________________________________
consensus TTCCTTTGGCAACATACCTGCGAATGATTTCCCTTCGGAATTGAAAGTACCGAAGGTCTG
. : . : . : . : . : . :
JMSF010E03+ ATAGCTCTTTTGATCCGCAAAAACGAAGCATAACATTGGTTCGACGCAGGAAACTTCACT
JMSF048J07+ ATAGCTCTTTTGATCCGCAAAAACGAAGCATAACATTGGTTCGACGCAGGAAACTTCACT
JMFF003L23+ ATAGCTCTTTTGATCCGCAAAAACGAAGCATAACATTGGTTCGACGCAGGAAACTTCACT
____________________________________________________________
consensus ATAGCTCTTTTGATCCGCAAAAACGAAGCATAACATTGGTTCGACGCAGGAAACTTCACT
. : . : . : . : . : . :
JMSF010E03+ CTTCTGAGCAGCAGCAACGTCTCTGAGGGCGCACGGTGGAGTGCTGCGGACCTCGTTGAT
JMSF048J07+ CTTCTGAGCAGCAGCAACGTCTCTGAGGGCGCACGGTGGAGTGCTGCGGACCTCGTTGAT
JMFF003L23+ CTTCTGAGCAGCAGCAACGTCTCTGAGGGCGCACGGTGGAGTGTTGCGGACCTCGTTGAT
____________________________________________________________
consensus CTTCTGAGCAGCAGCAACGTCTCTGAGGGCGCACGGTGGAGTGCTGCGGACCTCGTTGAT
. : . : . : . : . : . :
JMSF010E03+ AAGGACGTTGAGAACTCCATTTCCACTCCCTGGAATTGAGCAGAGC
JMSF048J07+ AAGGACGTTGAGAACTCCATTTCCACTCCCTGGAATTGAGCAGAGC
JMFF003L23+ AAGGACGTTGAGAACTCCATTTCCACTCCCTGGAATTGAGCAGAGCAATTGCAATTAATT
____________________________________________________________
consensus AAGGACGTTGAGAACTCCATTTCCACTCCCTGGAATTGAGCAGAGCAATTGCAATTAATT