Contig 004450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003B12Sequence373004450 (8)ref|XP_009792957.1|2e-34PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]
JMFF037A16Sequence560004450 (8)ref|XP_009792957.1|2e-86PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]383004450 (8)ref|XP_006347794.1|3e-36PREDICTED: DNA-damage-repair/toleration protein DRT102-like [Solanum tuberosum]
JMFN013L20Sequence598004450 (8)ref|XP_009792957.1|8e-95PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]
JMFN025I08Sequence624004450 (8)ref|XP_009792957.1|8e-95PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]
JMFN043D06Sequence621004450 (8)ref|XP_009792957.1|1e-101PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]
JMSF008O04Sequence321004450 (8)ref|XP_009792957.1|4e-39PREDICTED: DNA-damage-repair/toleration protein DRT102 [Nicotiana sylvestris]690004450 (8)ref|XP_006347794.1|8e-102PREDICTED: DNA-damage-repair/toleration protein DRT102-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF037A16- ATTGAGAAG
                      ____________________________________________________________
consensus ATTGAGAAG
 
. : . : . : . : . : . :
rJMFF037A16- NCAAGGAAGGTATTATACAAAGCACAAAGGATGTCTATAAGGTTTAATACACACATACAA
rJMSF008O04- AAAGGATGTCTATAAGGTTTAATACACACATACAA
                      ____________________________________________________________
consensus NCAAGGAAGGTATTATACAAAGCACAAAGGATGTCTATAAGGTTTAATACACACATACAA
 
. : . : . : . : . : . :
rJMFF037A16- ACATACATAGGAGGCATAAAATAAAGGAAGGATCTCATGAGAGTAAAACAGCACATAACA
rJMSF008O04- ACATACATAGGAGGCATAAAATAAAGGAAGGATCTCATGAGAGTAAAACAGCACATAACA
                      ____________________________________________________________
consensus ACATACATAGGAGGCATAAAATAAAGGAAGGATCTCATGAGAGTAAAACAGCACATAACA
 
. : . : . : . : . : . :
rJMFF037A16- GTAGAGCTAATTCTCCTTCTGCTGCTTATCCATGGCAGCATTGGCTGCGGCAAGATCCTC
rJMSF008O04- GTAGAGCTAATTCTCCTTCTGCTGCTTATCCATGGCAGCATTGGCTGCGGCAAGATCCTC
                      ____________________________________________________________
consensus GTAGAGCTAATTCTCCTTCTGCTGCTTATCCATGGCAGCATTGGCTGCGGCAAGATCCTC
 
. : . : . : . : . : . :
rJMFF037A16- GTCCAGGAATATATCCCACTGCCCCTCCCACTTGATGAAGAACTCTGTGTCCTCCAAATA
rJMSF008O04- GTCCAGGAATATATCCCACTGCCCCTCCCACTTGATGAAGAACTCTGTGTCCTCCAAATA
                      ____________________________________________________________
consensus GTCCAGGAATATATCCCACTGCCCCTCCCACTTGATGAAGAACTCTGTGTCCTCCAAATA
 
. : . : . : . : . : . :
rJMFF037A16- CTTTACCCGGTGAACATCCCCGGCCGGCGTGAACAAGTAATCCCCCACCCCCAAATCGNA
rJMSF008O04- CTTTACCCGGTGAACATCCCCGGCCGGCGTGAACAAGTAATCCCCCACCCCCAAATCGTA
                      ____________________________________________________________
consensus CTTTACCCGGTGAACATCCCCGGCCGGCGTGAACAAGTAATCCCCCACCCCCAAATCGTA
 
. : . : . : . : . : . :
rJMFF037A16- TTTCTCCCCTTTGCTCAAGNTCCACACTGTTTTGCTCCCCTGCAGCACCACCACATCGT
rJMSF008O04- TTTCTCCCCTTTGCTCAAGTTCCACACTGTTTTGCTCCCCTGCAGCACCACCACATCGTG
                      ____________________________________________________________
consensus TTTCTCCCCTTTGCTCAAGTTCCACACTGTTTTGCTCCCCTGCAGCACCACCACATCGTG
 
. : . : . : . : . : . :
rJMSF008O04- CCCAAACGTGTGGTGATGAGCCGGTTCCACACTCCCACCCTTGAACTTCACAAACGCCGA
                      ____________________________________________________________
consensus CCCAAACGTGTGGTGATGAGCCGGTTCCACACTCCCACCCTTGAACTTCACAAACGCCGA
 
. : . : . : . : . : . :
rJMSF008O04- CGTCGGCGTCTCCCGGACTATGCTCATTGACCCGCCCGGCATGATCTCAACGCCTGTAAA
JMFN013L20+ CCGGCATGATCTCAACGCCTGTAAA
JMFN043D06+ CCGGCATGATCTCAACGCCTGTAAA
                      ____________________________________________________________
consensus CGTCGGCGTCTCCCGGACTATGCTCATTGACCCGCCCGGCATGATCTCAACGCCTGTAAA
 
. : . : . : . : . : . :
rJMSF008O04- TTCCCGATTCTTAACCAGCGAGCATAGCGTACACGGCGTCGTTTCGTTCTCTGCGTTTTT
JMFN013L20+ TTCCCGATTC-TAACCAGCGAGCATAGCGTACACGGCGTCGTTTCGTTCTCTGCGTTTTT
JMFN043D06+ TTCCCGATTCTTAACCAGCGAGCATAGCGTACACGGCGTCGTTTCGTTCTCTGCGTTTTT
JMFN025I08+ TAACCAGCGAGCATAGCGTACACGGCGTCGTTTCGTTCTCTGCGTTTTT
                      ____________________________________________________________
consensus TTCCCGATTCTTAACCAGCGAGCATAGCGTACACGGCGTCGTTTCGTTCTCTGCGTTTTT
 
. : . : . : . : . : . :
rJMSF008O04- AGGGTTTTTCGGGGCTCCGATTTTTGACATTTCGGGGAGGGAACCGGTGAGGAATGATTC
JMFN013L20+ AGGGTTTTTCGGGGCTCCGATTTTTGACATTTCGGGGAGGGAACCGGTGAGGAATGATTC
JMFN043D06+ AGGGTTTTTCGGGGCTCCGATTTTTGACATTTCGGGGAGGGAACCGGTGAGGAATGATTC
JMFN025I08+ AGGGTTTTTCGGGGCTCCGATTTTTGACATTTCGGGGAGGGAACCGGTGAGGAATGATTC
JMFF037A16+ CGGGGAGGGAACCGGTGAGGAATGATTC
                      ____________________________________________________________
consensus AGGGTTTTTCGGGGCTCCGATTTTTGACATTTCGGGGAGGGAACCGGTGAGGAATGATTC
 
. : . : . : . : . : . :
rJMSF008O04- GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
JMFN013L20+ GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
JMFN043D06+ GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
JMFN025I08+ GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
JMFF037A16+ GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
                      ____________________________________________________________
consensus GATATCTGATGGCCAAGGGTTGGAGCTGGAGGCGGGGCAGGGAGATTTGAAGGGAGTGTT
 
. : . : . : . : . : . :
rJMSF008O04- CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGAC
JMFN013L20+ CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGACACGGC
JMFN043D06+ CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGACACGGC
JMFN025I08+ CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGACACGGC
JMFF037A16+ CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGACACGGC
                      ____________________________________________________________
consensus CAGGAAGGAATCTAGGATTTGCGAAGCGACATCGGGGGAAGTGTTCATGCCGGACACGGC
 
. : . : . : . : . : . :
JMFN013L20+ GAGGACGTTGCAATTGTTGATCGATCGGGCGTTGATGGCCTCGCCGGGGGTGAGGCAAGT
JMFN043D06+ GAGGACGTTGCAATTGTTGATCGATCGGGCGTTGATGGCCTCGCCGGGGGTGAGGCAAGT
JMFN025I08+ GAGGACGTTGCAATTGTTGATCGATCGGGCGTTGATGGCCTCGCCGGGGGTGAGGCAAGT
JMFF037A16+ GAGGACGTTGCAATTGTTGATCGATCGGGCGTTGATGGCCTCGCCGGGGGTGAGGCAAGT
JMFF003B12+ GGGTGAGGCAAGT
                      ____________________________________________________________
consensus GAGGACGTTGCAATTGTTGATCGATCGGGCGTTGATGGCCTCGCCGGGGGTGAGGCAAGT
 
. : . : . : . : . : . :
JMFN013L20+ GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
JMFN043D06+ GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
JMFN025I08+ GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
JMSF008O04+ GGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
JMFF037A16+ GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
JMFF003B12+ GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
                      ____________________________________________________________
consensus GGCGGCGTAGACGCCGGGGAATTTGTTGGCGAAGATGGCGACTCCGACGCCGGTGCCGCA
 
. : . : . : . : . : . :
JMFN013L20+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
JMFN043D06+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
JMFN025I08+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
JMSF008O04+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
JMFF037A16+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
JMFF003B12+ GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAACGGAGGC
                      ____________________________________________________________
consensus GGCGACGAGGCCTCGAGTCTCAATTGATGGATCGTCGGCGGCGGCTTGGCTAAC-GCGGC
 
. : . : . : . : . : . :
JMFN013L20+ GCCCGATTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
JMFN043D06+ GCCCGATTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
JMFN025I08+ GCCCGATTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
JMSF008O04+ GCCCGACTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
JMFF037A16+ GCCCGATTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
JMFF003B12+ GCCCGATTTCTTCCCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
                      ____________________________________________________________
consensus GCCCGATTTCTTCGCCGACTGAGTAGTACTTGTCGGTGCCTAGGTCTTCGACGTTGATGT
 
. : . : . : . : . : . :
JMFN013L20+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
JMFN043D06+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
JMFN025I08+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
JMSF008O04+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
JMFF037A16+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
JMFF003B12+ TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
                      ____________________________________________________________
consensus TCAAGGCGCGGAGCTGAGCTACCAGGGTGTCCTTGAGGTCGCTGCCGAAGGAATCGGCTC
 
. : . : . : . : . : . :
JMFN013L20+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCC
JMFN043D06+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAG
JMFN025I08+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAGAGA
JMSF008O04+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAGAGA
JMFF037A16+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAGAGA
JMFF003B12+ CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAGAGA
                      ____________________________________________________________
consensus CGGCGATGATCTTAAGGCGGCGATCGGTGGAAGCCATGGGGACTGTGTTGAGTGAAGAGA
 
. : . : . : . : . : . :
JMFN025I08+ GTGGGCGCTGGTGAAAGAGTTTTCTTGAGATAGATA
JMSF008O04+ GTGGGCGCTGGTGAAAGAGTTTTCTTGAGATAGATAGATAGATTCC
JMFF037A16+ GTGGGCGCTGGTGAAAGAGTTTTCTTGAGATAGATAGATAGATTCC
JMFF003B12+ GTGGGCGCTGGTGAAAGAGTTTTCTTGAGATAGATAGATAGATTCCTCGGAGAGAAGATT
                      ____________________________________________________________
consensus GTGGGCGCTGGTGAAAGAGTTTTCTTGAGATAGATAGATAGATTCCTCGGAGAGAAGATT