Contig 004447:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N05Sequence556004447 (4)ref|XP_009613479.1|4e-50PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]711005480 (2)ref|XP_006357406.1|7e-58PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMFF017J09Sequence578004447 (4)ref|XP_009613479.1|5e-56PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMFF032J16Sequence550004447 (4)ref|XP_010322825.1|3e-50PREDICTED: subtilisin-like protease [Solanum lycopersicum]
JMFF038B24Sequence457004447 (4)ref|XP_006342924.1|5e-59PREDICTED: subtilisin-like protease-like [Solanum tuberosum]743005480 (2)ref|XP_010322825.1|9e-53PREDICTED: subtilisin-like protease [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF038B24+ CTGC
                      ____________________________________________________________
consensus CTGC
 
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JMFF038B24+ ATCGCACCAAAAGCTCCAATCGCCACGGAATCGGTATAGTAGGGCCCAGGGGAGGTACGT
                      ____________________________________________________________
consensus ATCGCACCAAAAGCTCCAATCGCCACGGAATCGGTATAGTAGGGCCCAGGGGAGGTACGT
 
. : . : . : . : . : . :
JMFF038B24+ CCAATAGAGAGAGAAAGCACGTCCACGCCGTCTTCAACAGCTTTATCCATGGCAGCGAGA
                      ____________________________________________________________
consensus CCAATAGAGAGAGAAAGCACGTCCACGCCGTCTTCAACAGCTTTATCCATGGCAGCGAGA
 
. : . : . : . : . : . :
JMFF038B24+ ATATCGGCACGGGAACAGCCTGAATTCCAACAAACTTTGTAAGAAGCTATCCTGGCTCTT
                      ____________________________________________________________
consensus ATATCGGCACGGGAACAGCCTGAATTCCAACAAACTTTGTAAGAAGCTATCCTGGCTCTT
 
. : . : . : . : . : . :
JMFF038B24+ ATCGCCATGCCTCTGGCTTCTCCCGGCGCGTATCCCGCAAAGCTGGCGTTTGCAACAATA
                      ____________________________________________________________
consensus ATCGCCATGCCTCTGGCTTCTCCCGGCGCGTATCCCGCAAAGCTGGCGTTTGCAACAATA
 
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JMFF038B24+ GATCCGGCCGCAATAGAGGCACAAATCGTGCCATGCCCATTCGTATCCCTCGGCGAAATC
                      ____________________________________________________________
consensus GATCCGGCCGCAATAGAGGCACAAATCGTGCCATGCCCATTCGTATCCCTCGGCGAAATC
 
. : . : . : . : . : . :
JMFF038B24+ GACTCCACCGATGCATCCATTGCTCTTCCCAGAAAAGCCTCGTAAGCGTCGTAAAAAGCA
                      ____________________________________________________________
consensus GACTCCACCGATGCATCCATTGCTCTTCCCAGAAAAGCCTCGTAAGCGTCGTAAAAAGCA
 
. : . : . : . : . : . :
JMFF038B24+ CGAGCACCAATGAGTTTCTGATTACACGACGTCGCCGGAAAATCTGGAGCAACCTCGCAC
JMFF002N05+ TGGAGCAACCTCGCAC
                      ____________________________________________________________
consensus CGAGCACCAATGAGTTTCTGATTACACGACGTCGCCGGAAAATCTGGAGCAACCTCGCAC
 
. : . : . : . : . : . :
JMFF038B24+ GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGA
JMFF017J09+ GCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
JMFF032J16+ GCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
JMFF002N05+ GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
                      ____________________________________________________________
consensus GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
 
. : . : . : . : . : . :
JMFF017J09+ GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
JMFF032J16+ GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
JMFF002N05+ GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
                      ____________________________________________________________
consensus GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
 
. : . : . : . : . : . :
JMFF017J09+ CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
JMFF032J16+ CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
JMFF002N05+ CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
                      ____________________________________________________________
consensus CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
 
. : . : . : . : . : . :
JMFF017J09+ AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
JMFF032J16+ AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
JMFF002N05+ AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
                      ____________________________________________________________
consensus AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
 
. : . : . : . : . : . :
JMFF017J09+ GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
JMFF032J16+ GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
JMFF002N05+ GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
                      ____________________________________________________________
consensus GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
 
. : . : . : . : . : . :
JMFF017J09+ GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
JMFF032J16+ GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
JMFF002N05+ GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
                      ____________________________________________________________
consensus GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
 
. : . : . : . : . : . :
JMFF017J09+ TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
JMFF032J16+ TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
JMFF002N05+ TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
                      ____________________________________________________________
consensus TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
 
. : . : . : . : . : . :
JMFF017J09+ TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
JMFF032J16+ TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
JMFF002N05+ TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
                      ____________________________________________________________
consensus TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
 
. : . : . : . : . : . :
JMFF017J09+ AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGAT
JMFF032J16+ AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGAT
JMFF002N05+ AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGATGATGAT
                      ____________________________________________________________
consensus AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGATGATGAT