Contig 004443:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002G07Sequence567004443 (6)ref|XP_011028654.1|4e-77PREDICTED: coatomer subunit alpha-1 [Populus euphratica]
JMFS030C12Sequence470004443 (6)ref|XP_011028654.1|1e-56PREDICTED: coatomer subunit alpha-1 [Populus euphratica]
JMFS037B12Sequence590004443 (6)ref|XP_011074632.1|1e-133PREDICTED: coatomer subunit alpha-1-like [Sesamum indicum]
JMFS077G09Sequence609004443 (6)gb|KDO49492.1|9e-140hypothetical protein CISIN_1g000933mg [Citrus sinensis]
JMFS125H06Sequence589004443 (6)gb|KDP41738.1|2e-81hypothetical protein JCGZ_26756 [Jatropha curcas]
JMFS137E03Sequence605004443 (6)ref|XP_002957821.1|8e-100hypothetical protein VOLCADRAFT_77684 [Volvox carteri f. nagariensis] gb|EFJ4114

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS037B12+ CTTGAGTGAAATAAAACACAGGAAACATTGTTCATG
                      ____________________________________________________________
consensus CTTGAGTGAAATAAAACACAGGAAACATTGTTCATG
 
. : . : . : . : . : . :
JMFS037B12+ TGGCCTCTCAATGTGTCCACCTCCCAAGCTTTTGTGTCATTCATTCTCCAAATCTTGACT
                      ____________________________________________________________
consensus TGGCCTCTCAATGTGTCCACCTCCCAAGCTTTTGTGTCATTCATTCTCCAAATCTTGACT
 
. : . : . : . : . : . :
JMFS037B12+ TGGCGATCATCTGCACCAGAAACAATTAGGGGGAGTGTAGGATGAAAAGAAGCCCAATTA
JMFS077G09+ AGCCCAATTA
                      ____________________________________________________________
consensus TGGCGATCATCTGCACCAGAAACAATTAGGGGGAGTGTAGGATGAAAAGAAGCCCAATTA
 
. : . : . : . : . : . :
JMFS037B12+ ACACCTCTATCATGGCCCTCTAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
JMFS077G09+ ACACCTCTATCATGGCCCTATAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
                      ____________________________________________________________
consensus ACACCTCTATCATGGCCCTCTAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
 
. : . : . : . : . : . :
JMFS037B12+ TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
JMFS077G09+ TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
                      ____________________________________________________________
consensus TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
 
. : . : . : . : . : . :
JMFS037B12+ AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
JMFS077G09+ AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
                      ____________________________________________________________
consensus AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
 
. : . : . : . : . : . :
JMFS037B12+ TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
JMFS077G09+ TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
JMFS137E03+ GGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
                      ____________________________________________________________
consensus TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
 
. : . : . : . : . : . :
JMFS037B12+ CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS077G09+ CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS137E03+ CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS125H06+ CGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGCACTAACAATC
JMFF002G07+ GTCTGATCATCACTTGCACTAACAATC
                      ____________________________________________________________
consensus CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
 
. : . : . : . : . : . :
JMFS037B12+ CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS077G09+ CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS137E03+ CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS030C12+ GGAGGGTA
JMFS125H06+ CAGGGAGATTCATGGTGAAACTGGACAGTTCGGATGTAATCGAGATGTCCAAGGAGGGTA
JMFF002G07+ CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
                      ____________________________________________________________
consensus CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
 
. : . : . : . : . : . :
JMFS037B12+ AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS077G09+ AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS137E03+ AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS030C12+ AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS125H06+ AACAAACACCTATGTTGCTTGTAATTCCATACCTTGATTTTATAATCATCACCTCCAGAT
JMFF002G07+ AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
                      ____________________________________________________________
consensus AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
 
. : . : . : . : . : . :
JMFS037B12+ ACGAAGAGAG
JMFS077G09+ ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS137E03+ ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS030C12+ ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS125H06+ ACGAAGAGAGGCTGAGAATTGTGGAAGTGAACGCCGCGAACAGGGCCATCATGCTCGTCG
JMFF002G07+ ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
                      ____________________________________________________________
consensus ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
 
. : . : . : . : . : . :
JMFS077G09+ AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS137E03+ AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS030C12+ AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS125H06+ AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCACTGTGAAGG
JMFF002G07+ AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
                      ____________________________________________________________
consensus AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
 
. : . : . : . : . : . :
JMFS077G09+ CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTT
JMFS137E03+ CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
JMFS030C12+ CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
JMFS125H06+ CTGGCCAGGATCCATGGCCGCTTATTGTGGAAGCTCAGCCCCTTCACTCGGTTACTCTTC
JMFF002G07+ CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
                      ____________________________________________________________
consensus CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
 
. : . : . : . : . : . :
JMFS137E03+ GTCTCGAATTTCGTCAACATTT
JMFS030C12+ GTCTCGAATTTCGTCAACATTT
JMFS125H06+ GTCTCGAACTTCGTCAACATTT
JMFF002G07+ GTCTCGAATTTCGTCAACATTTCCCCTTCCCCTCACTCACTCCCCCAATCCGAGCTTCAA
                      ____________________________________________________________
consensus GTCTCGAATTTCGTCAACATTTCCCCTTCCCCTCACTCACTCCCCCAATCCGAGCTTCAA
 
. : . : . : . : . : . :
JMFF002G07+ TTCTCAGGCTTTCTCGAACAGAAATCTGGAAAATGGAAATCTAGCTGAACGCAGAGATCG
                      ____________________________________________________________
consensus TTCTCAGGCTTTCTCGAACAGAAATCTGGAAAATGGAAATCTAGCTGAACGCAGAGATCG
 
. : . : . : . : . : . :
JMFF002G07+ AATTGAATTCAGATCTGCAATGAACGGTGCATTTCACGGAGATCGGTGGCTCTTGTGAAC
                      ____________________________________________________________
consensus AATTGAATTCAGATCTGCAATGAACGGTGCATTTCACGGAGATCGGTGGCTCTTGTGAAC
 
. : . : . : . : . : . :
JMFF002G07+ CCCAAGCTGGGCGGGTAGGCTCACTACTCACTAGGCCGGTGGAGTTTTCTGAATTAGATC
                      ____________________________________________________________
consensus CCCAAGCTGGGCGGGTAGGCTCACTACTCACTAGGCCGGTGGAGTTTTCTGAATTAGATC