Contig 004441:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C03Sequence254004441 (2)143001379 (2)
JMSF026C16Sequence111004441 (2)684001379 (2)gb|AAF74563.1|AF208544_17e-40heat stress transcription factor A3 [Solanum peruvianum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF002C03+ CNGAGGAGACAAAA
                      ____________________________________________________________
consensus CNGAGGAGACAAAA
 
. : . : . : . : . : . :
JMFF002C03+ CNGGGAACCCGGGATCCATNTCAGANGAAAACGGTGTNGTATTGGACGGTAGCGGAGGAG
                      ____________________________________________________________
consensus CNGGGAACCCGGGATCCATNTCAGANGAAAACGGTGTNGTATTGGACGGTAGCGGAGGAG
 
. : . : . : . : . : . :
JMFF002C03+ TTTCGGGTNTCCGGAAAGTCGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA
                      ____________________________________________________________
consensus TTTCGGGTNTCCGGAAAGTCGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA
 
. : . : . : . : . : . :
JMSF026C16+ TGGGTTCATTTCCCTTTTNTTTTTNTNTTTTACGGAAAAAAAAA
JMFF002C03+ ATGGGTTTTTNTNTTCTGGGTTCATTTCCCTTTTCTTTTTCTCTTTTACGGAAAAAAAAA
                      ____________________________________________________________
consensus ATGGGTTTTTNTNTTCTGGGTTCATTTCCCTTTTCTTTTTCTCTTTTACGGAAAAAAAAA
 
. : . : . : . : . : . :
JMSF026C16+ ACAGAGTAAATTGAGAAGAAGACGACGATAAGAGGGGAGATGGAAGAAATGAAATCT
JMFF002C03+ ACAGAGTAAATTGAGAAGAAGACGACGATAAGAGGGGAGATGGAAGAAATGAAATCTTCA
                      ____________________________________________________________
consensus ACAGAGTAAATTGAGAAGAAGACGACGATAAGAGGGGAGATGGAAGAAATGAAATCTTCA