| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002B15 | Sequence | 543 | 004440 (5) | ref|XP_006354941.1| | 8e-38 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 696 | 001146 (5) | ref|XP_009781396.1| | 9e-59 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMFF009G02 | Sequence | 589 | 004440 (5) | ref|XP_009588431.1| | 1e-65 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana | 458 | 001146 (5) | |||
| JMFF026C19 | Sequence | 483 | 004440 (5) | ref|XP_006354941.1| | 9e-16 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 610 | 001146 (5) | ref|XP_009781396.1| | 2e-39 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMFF034C05 | Sequence | 481 | 004440 (5) | ref|XP_009781397.1| | 2e-57 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X3 [Nicotiana | 724 | 001146 (5) | ref|XP_009781396.1| | 5e-61 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMSF014J23 | Sequence | 378 | 004440 (5) | ref|XP_006354941.1| | 2e-08 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 613 | 001146 (5) | ref|XP_006354945.1| | 2e-86 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X3 [Solanum t |
This contig is upended
. : . : . : . : . : . :
JMFF009G02+ GGACATTCAGAATGGA
____________________________________________________________
consensus GGACATTCAGAATGGA
. : . : . : . : . : . :
JMFF034C05+ CTTCGGCAATGCAGTCTAATAAACCTAAGC
JMFF009G02+ TTTCAGTGCTTCTCATTCTCTTTGGGACACCTTCGGCAATGCAGTCTAATAAACNTAAGC
____________________________________________________________
consensus TTTCAGTGCTTCTCATTCTCTTTGGGACACCTTCGGCAATGCAGTCTAATAAACCTAAGC
. : . : . : . : . : . :
JMFF034C05+ TCTTCCTATCTCTTTTCTTTATTGCATGATTTTCAAAGTTGGTTACATCTTGACTGCAAT
JMFF009G02+ TCTCCCTATCTCTTTTCTTTATTGCATGATTTTCAAAGTTGGTTACATCTTGACTGCAAT
____________________________________________________________
consensus TCTTCCTATCTCTTTTCTTTATTGCATGATTTTCAAAGTTGGTTACATCTTGACTGCAAT
. : . : . : . : . : . :
JMFF034C05+ CAGCACAAAATGCAGCTTCTTTCTCACATGAACCCTCATCAAAAACTTGGACATGGAAAT
JMFF009G02+ CAGCACAAAATGCAGCTTCTTTCTCACATGAACCCTCATCAAAAACTTGGACATGGAAAT
JMFF002B15+ AAAT
____________________________________________________________
consensus CAGCACAAAATGCAGCTTCTTTCTCACATGAACCCTCATCAAAAACTTGGACATGGAAAT
. : . : . : . : . : . :
JMFF034C05+ CCAAATCACCATCATATCTAAAAACCAAGGAATCCCCATACTCCAAACAGTGATCCTTAA
JMFF009G02+ CCAAATCACCATCATATCTAAAAACCAAGGAATCCCCATACTCCAAACAGTGATCCTTAA
JMFF026C19+ TAA
JMFF002B15+ CCAAATCACCATCATATCTAAAAACCAAGGAATCCCCATACTCCAAACAGTGATCCTTAA
____________________________________________________________
consensus CCAAATCACCATCATATCTAAAAACCAAGGAATCCCCATACTCCAAACAGTGATCCTTAA
. : . : . : . : . : . :
JMFF034C05+ CAAATACTGTCCATCCATCATGAAAGAATAAGCCACCATCAAG-CTGACTTACACCCACA
JMFF009G02+ CAAATACTGTCCATCCATCATGAAAGAATAAGCCACCATCAAG-CTGACTTACACCCACA
JMFF026C19+ CAAATACTGTCCATCCATCANGAAAGAATAAGCCACCATCAAGNCTGACTTACACCCACA
JMFF002B15+ CAAATACTGTCCATCCATCATGAAAGAATAAGCCACCATCAAG-CTGACTTACACCCACA
____________________________________________________________
consensus CAAATACTGTCCATCCATCATGAAAGAATAAGCCACCATCAAG-CTGACTTACACCCACA
. : . : . : . : . : . :
JMFF034C05+ TACCATGTGTTTCCACTGGGACCTACCAAAGATGCCATCCCAGATGTCACTCCATCCATA
JMFF009G02+ TACCATGTGTTTCCACTGGGACCTACCAAAGATGCCATCCCAGATGTCACTCCATCCATA
JMFF026C19+ TACCATGTGTTTCCACTGGGACCTACCAAAGATGCCATCCCAGATGTCACTCCATCCATA
JMSF014J23+ CCATCCATA
JMFF002B15+ TACCATGTGTTTCCACTGGGACCTACCAAAGATGCCATCCCAGATGTCACTCCATCCATA
____________________________________________________________
consensus TACCATGTGTTTCCACTGGGACCTACCAAAGATGCCATCCCAGATGTCACTCCATCCATA
. : . : . : . : . : . :
JMFF034C05+ TGTTTGGCAAATTTAGATGGAATTTTCAACTTCTCAGAGCTGATCGAAGGATTAAAGCCA
JMFF009G02+ TGTTTGGCAAATTTAGATGGAATTTTCAATTTCTCAGAGCTGATCGAAGGATTAAAGCCA
JMFF026C19+ TGTTTGGCAAATTTAGATGGAATTTTCAATTTCTCAGAGCTGATCGAAGGATTAAAGCCA
JMSF014J23+ TGTTTGGCAAATTTAGATGGAATTTTCAATTTCTCAGAGCTGATCGAAGGATTAAAGCCA
JMFF002B15+ TGTTTGGCAAATTTAGATGGAATTTTCAATTTCTCAGAGCTGATCGAAGGATTAAAGCCA
____________________________________________________________
consensus TGTTTGGCAAATTTAGATGGAATTTTCAATTTCTCAGAGCTGATCGAAGGATTAAAGCCA
. : . : . : . : . : . :
JMFF034C05+ TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
JMFF009G02+ TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
JMFF026C19+ TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
JMSF014J23+ TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
JMFF002B15+ TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
____________________________________________________________
consensus TGGAGGAAGTGAGGTTTCCTTCCATTCGACATCTCCGCACCAAAAGCCTGTGTTCTCCCG
. : . : . : . : . : . :
JMFF034C05+ TATTTCAAAATTCAAGTAAAATCCAAAGCCCT
JMFF009G02+ TATTTCAAAATTCAAGTAAAATCCAAAGCCCTACCTCCCATCAAAGCTCGGAAGCTTTCC
JMFF026C19+ TATTTCAAAATTCAAGTAAAATCCAAAGCCCTACCTCCCATCAAAGCTCGGAAGCTTTCC
JMSF014J23+ TATTTCAAAATTCAAGTAAAATCCAAAGCCCTACCTCCCATCAAAGCTCGGAAGCTTTCC
JMFF002B15+ TATTTCAAAATTCAAGTAAAATCCAAAGCCCTACCTCCCATCAAAGCTCGGAAGCTTTCC
____________________________________________________________
consensus TATTTCAAAATTCAAGTAAAATCCAAAGCCCTACCTCCCATCAAAGCTCGGAAGCTTTCC
. : . : . : . : . : . :
JMFF009G02+ TTAACCGCATTTTCCTCGATCGAAATCGGGACGC
JMFF026C19+ TTAACCGCATTTTCCTCGATCGAAATCGGGACGCGAATTGTGAAAAAGTTCAGAAGAAGC
JMSF014J23+ TTAACCGCATTTTCCTCGATCGAAATCGGGACGCGAATTGTGAAAAAGTTCAGAAGAAGC
JMFF002B15+ TTAACCGCATTTTCCTCGATCGAAATCGGGACGCGAATTGTGAAAAAGTTCAGAAGAAGC
____________________________________________________________
consensus TTAACCGCATTTTCCTCGATCGAAATCGGGACGCGAATTGTGAAAAAGTTCAGAAGAAGC
. : . : . : . : . : . :
JMFF026C19+ TGAGAAAAAGGGGGAAATTTTTTACTGAAAACGACTCGTTGAAGGACAAAAGAAGAAGGG
JMSF014J23+ TGAGAAAAAGGGGGAAATTTTTTACTGAAAACGACTCGTTGAAGGACAAAAGAAGAAGGG
JMFF002B15+ TGAGAAAAAGGGGGAAATTTTTTACTGAAAACGACTCGTTGAAGGACAAAAGAAGAAGGG
____________________________________________________________
consensus TGAGAAAAAGGGGGAAATTTTTTACTGAAAACGACTCGTTGAAGGACAAAAGAAGAAGGG
. : . : . : . : . : . :
JMFF026C19+ AAATTTTGATGAAATTCGCATTATATTCACAGGAGGAAAATGCTCCCCGTGTGCCAGCAT
JMSF014J23+ AAATTTTGATGAAATTCGCATTATATTCACAGGAGGAAAATGCTCCCCGT
JMFF002B15+ AAATTTTGATGAAATTCGCATTATATTCACAGGAGGAAAATGCTCCCCGTGTGCCAGCAT
____________________________________________________________
consensus AAATTTTGATGAAATTCGCATTATATTCACAGGAGGAAAATGCTCCCCGTGTGCCAGCAT