Contig 004428:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001H04Sequence236004428 (4)
JMCP002F07Sequence241004428 (4)
JMCP003E10Sequence236004428 (4)
JMCP017G01Sequence238004428 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP002F07+ A
                      ____________________________________________________________
consensus A
 
. : . : . : . : . : . :
rJMCP002F07+ TTTAGACTGCCATCACATTTTCGAGAGCAAAAGCAGGATGCTGAACTTAGCCCTTCACCA
JMCP003E10+ CTGCCATCACATTTTCGAGAGCAAAAGCAGGATGCTGAACTTAGCCCTTCACCA
JMCP001H04+ CTGCCATCACATTTTCGAGAGCAAAAGCAGGATGCTGAACTTAGCCCTTCACCA
JMCP017G01+ CTGCCATCACATTTTCGAGAGCAAAAGCAGGATGCTGAACTTAGCCCTTCACCA
                      ____________________________________________________________
consensus TTTAGACTGCCATCACATTTTCGAGAGCAAAAGCAGGATGCTGAACTTAGCCCTTCACCA
 
. : . : . : . : . : . :
rJMCP002F07+ GCCTCCCGCCCAACAAAAATTATATTTCTCAAGTACTCGTATACAAGAAACAAAGAAAGA
JMCP003E10+ GCCTCCCGCCCAACAAAAATTATATTTCTCAAGTACTCGTATACAAGAAACAAAGAAAGA
JMCP001H04+ GCCTCCCGCCCAACAAAAATTATATTagaCAAGTACagcTATACAAGAAACAAAGAAAGA
JMCP017G01+ GCCTCCCGCCCAACAAAAATTATATTTCTCAAGTACTCGTATACAAGAAACAAAGAAAGA
                      ____________________________________________________________
consensus GCCTCCCGCCCAACAAAAATTATATTTCTCAAGTACTCGTATACAAGAAACAAAGAAAGA
 
. : . : . : . : . : . :
rJMCP002F07+ ACCCAAAGGTGAATGAAAAAACACATGGATATCGAGAAGTAGGTTTGGTTTGGTTTGGTT
JMCP003E10+ ACCCAAAGGTGAATGAAAAAACACATGGATATCGAGAAGTAGGTTTGGTTTGGTTTGGTT
JMCP001H04+ ACCCAAAGGTGAATGAAAAAACACATGGATATCGAGAAGTAGGTTTGGTTTGGTTTGGTT
JMCP017G01+ ACCCAAAGGTGAATGAAAAAACACATGGATATCGAGAAGTAGGTTTGGTTTGGTTTGGTT
                      ____________________________________________________________
consensus ACCCAAAGGTGAATGAAAAAACACATGGATATCGAGAAGTAGGTTTGGTTTGGTTTGGTT
 
. : . : . : . : . : . :
rJMCP002F07+ TCATCTTACAAACCTTTGCTACTAGAAAGTCAGTCAAGATGCCATTGCTTCCTAGTAATT
JMCP003E10+ TCATCTTACAAACCTTTGCTACTAGAAAGTCAGTCAAGATGCCATTGCCTCCTAGTAATT
JMCP001H04+ TCAagaTACAAACCTTTGCTACTAGAAAGTCAGTCAAGATGCCATTGCCTCCTAGTAATT
JMCP017G01+ TCATCTTACAAACCTTTGCTACTAGAAAGTCAGTCAAGATGCCATTGCCTCCTAGTAATT
                      ____________________________________________________________
consensus TCATCTTACAAACCTTTGCTACTAGAAAGTCAGTCAAGATGCCATTGCCTCCTAGTAATT