| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009B22 | Sequence | 587 | 004424 (19) | ref|XP_006352534.1| | 8e-84 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 499 | 004424 (19) | gb|KDP39259.1| | 5e-64 | hypothetical protein JCGZ_01016 [Jatropha curcas] |
| JMFN002F10 | Sequence | 566 | 004424 (19) | ref|XP_006352534.1| | 4e-83 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | |||||
| JMFN034E16 | Sequence | 599 | 004424 (19) | ref|XP_011097778.1| | 1e-70 | PREDICTED: 30S ribosomal protein S10, chloroplastic [Sesamum indicum] | |||||
| JMSF018E23 | Sequence | 426 | 004424 (19) | ref|XP_006352534.1| | 6e-46 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 638 | 004424 (19) | ref|XP_011097778.1| | 2e-77 | PREDICTED: 30S ribosomal protein S10, chloroplastic [Sesamum indicum] |
| JMSF018P22 | Sequence | 282 | 004424 (19) | ref|XP_006352534.1| | 9e-12 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 750 | 004424 (19) | ref|XP_006352534.1| | 1e-87 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] |
| JMSF031A20 | Sequence | 702 | 004424 (19) | ref|XP_006352534.1| | 1e-87 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 623 | 004424 (19) | ref|XP_011097778.1| | 2e-77 | PREDICTED: 30S ribosomal protein S10, chloroplastic [Sesamum indicum] |
| JMSF031G17 | Sequence | 691 | 004424 (19) | ref|XP_006352534.1| | 1e-87 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 632 | 004424 (19) | ref|XP_006352534.1| | 8e-78 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] |
| JMSF039M16 | Sequence | 661 | 004424 (19) | ref|XP_006352534.1| | 2e-89 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 792 | 004424 (19) | ref|XP_006352534.1| | 2e-87 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] |
| JMSF042P16 | Sequence | 735 | 004424 (19) | ref|XP_006352534.1| | 6e-88 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 644 | 004424 (19) | ref|XP_011097778.1| | 3e-77 | PREDICTED: 30S ribosomal protein S10, chloroplastic [Sesamum indicum] |
| JMSF049J03 | Sequence | 648 | 020113 | emb|CBI37849.3| | 2e-10 | unnamed protein product [Vitis vinifera] | 635 | 004424 (19) | ref|XP_011097778.1| | 1e-75 | PREDICTED: 30S ribosomal protein S10, chloroplastic [Sesamum indicum] |
| JMSF052L24 | Sequence | 618 | 004424 (19) | ref|XP_006352534.1| | 2e-85 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] | 788 | 004424 (19) | ref|XP_006352534.1| | 1e-87 | PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFN034E16+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
rJMFF009B22- ATGATGGATGGATGTTAACTATTCAAATATTATACATAAAGATTGTGT
JMFN034E16+ AACAATGCATATATGATGGATGGATGTTAACTATTCAAATATTATACATAAAGATTGTGT
rJMSF018E23- AATATTATACATAAAGATTGTGT
rJMSF042P16- AATATTATACATAAAGATTGTGT
rJMSF049J03- TATACATAAAGATTGTGT
rJMSF018P22- ATATTATACATAAAGATTGTGT
rJMSF031G17- CATAAAGATTGTGT
rJMSF031A20- ATAAAGATTGTGT
rJMSF039M16- CATAAAGATTGTGT
rJMSF052L24- AGATTGTGT
____________________________________________________________
consensus AACAATGCATATATGATGGATGGATGTTAACTATTCAAATATTATACATAAAGATTGTGT
. : . : . : . : . : . :
rJMFF009B22- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
JMFN034E16+ CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF018E23- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF042P16- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF049J03- CTATCACNGCTTCCACAAGCTAAAATTTGNTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF018P22- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF031G17- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF031A20- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
rJMSF039M16- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
JMSF042P16+ TCAGCACTCATTCTATTCAGATTTCAAAAA
JMSF031A20+ TTCAAAAA
rJMSF052L24- CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
____________________________________________________________
consensus CTATCACTGCTTCCACAAGCTAAAATTTGTTCAGCACTCATTCTATTCAGATTTCAAAAA
. : . : . : . : . : . :
rJMFF009B22- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
JMFN034E16+ GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF018E23- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF042P16- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF049J03- GCAGAACTGCAAATGTGATGGAAAAAAAATANGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF018P22- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF031G17- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF031A20- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
rJMSF039M16- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
JMSF042P16+ GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
JMSF031A20+ GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
JMSF031G17+ GAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
JMSF039M16+ ATGG
rJMSF052L24- GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
____________________________________________________________
consensus GCAGAACTGCAAATGTGATGGAAAAAAAATAAGGGTGCTCCACTGCTCCATTGACAATGG
. : . : . : . : . : . :
rJMFF009B22- AGCAGAAAGCTAACTNAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMFN034E16+ AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF018E23- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF042P16- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF049J03- AGCNGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCNACTCCNGCAGGAAGGTC
rJMSF018P22- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF031G17- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF031A20- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
rJMSF039M16- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMSF042P16+ AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMSF031A20+ AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMFN002F10+ GCAGGAAGGTC
JMSF031G17+ AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMFF009B22+ CAGCAGGAAGGTC
JMSF039M16+ AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
JMSF052L24+ CGACTCCAGCAGGAAGGTC
rJMSF052L24- AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
____________________________________________________________
consensus AGCAGAAAGCTAACTTAACTTTCACAGCTTGACCTCCACGTCGACTCCAGCAGGAAGGTC
. : . : . : . : . : . :
rJMFF009B22- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMFN034E16+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF018E23- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF042P16- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF049J03- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF018P22- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF031G17- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF031A20- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF039M16- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMSF042P16+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMSF031A20+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMFN002F10+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMSF031G17+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMFF009B22+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMSF039M16+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
JMSF052L24+ GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
rJMSF052L24- GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
____________________________________________________________
consensus GAGCTGCATCAACGAGTCGATTGTTTGGGCAGTTGGGTAAAGAATGTCAATAAGGCGTTG
. : . : . : . : . : . :
rJMFF009B22- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMFN034E16+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF018E23- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF042P16- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF049J03- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF018P22- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF031G17- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF031A20- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF039M16- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMSF042P16+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMSF031A20+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMFN002F10+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMSF031G17+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMFF009B22+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMSF039M16+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
JMSF052L24+ ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
rJMSF052L24- ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
____________________________________________________________
consensus ATGCGTTCTAATCTCGAAATGGAACCTGGCATCTTTGTCGACGTGTGGGGATTTAAGCAC
. : . : . : . : . : . :
rJMFF009B22- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMFN034E16+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF018E23- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF042P16- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF049J03- GCAGNATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF018P22- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF031G17- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF031A20- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF039M16- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF042P16+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF031A20+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMFN002F10+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF018E23+ GGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF031G17+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMFF009B22+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF039M16+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
JMSF052L24+ GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
rJMSF052L24- GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
____________________________________________________________
consensus GCAGTATATTCTCTTCTTGGTAGGCAATGGCACGGGACCCACGGTCTTCGCGTTTGTATT
. : . : . : . : . : . :
rJMFF009B22- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCANAGGTACCCAGTATGACCT
JMFN034E16+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF018E23- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF042P16- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF049J03- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF018P22- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF031G17- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF031A20- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF039M16- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF042P16+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF031A20+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMFN002F10+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF018E23+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF031G17+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMFF009B22+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF039M16+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
JMSF052L24+ CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
rJMSF052L24- CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
____________________________________________________________
consensus CCTCGCTGCATCCATTATCTGCTTGCATGAGTCTTCTATCAGAGGTACCCAGTATGACCT
. : . : . : . : . : . :
rJMFF009B22- CAACTTGATTCTAATCTTATGCTTTGGTG
JMFN034E16+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF018E23- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF042P16- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF049J03- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF018P22- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF031G17- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF031A20- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF039M16- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF042P16+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF031A20+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMFN002F10+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF018E23+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF018P22+ CGGAATCAAAGCTGACATCTGG
JMSF031G17+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMFF009B22+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF039M16+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
JMSF052L24+ CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
rJMSF052L24- CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
____________________________________________________________
consensus CAACTTGATTCTAATCTTATGCTTTGGTGCCACCTTATCGGAATCAAAGCTGACATCTGG
. : . : . : . : . : . :
JMFN034E16+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACT
rJMSF018E23- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF042P16- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF049J03- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGANTCCAAGACTTC
rJMSF018P22- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF031G17- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF031A20- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF039M16- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF042P16+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF031A20+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMFN002F10+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF018E23+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF018P22+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF031G17+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMFF009B22+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF039M16+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
JMSF052L24+ AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
rJMSF052L24- AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
____________________________________________________________
consensus AAAGGAAGTAGTAGAAACTTCATCCTCAGTAGCAGTAACATCGGCGGAGTCCAAGACTTC
. : . : . : . : . : . :
rJMSF018E23- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF042P16- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF049J03- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGANGGGCTGGAATTTANC
rJMSF018P22- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF031G17- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF031A20- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF039M16- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF042P16+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF031A20+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMFN002F10+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF018E23+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF018P22+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF031G17+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMFF009B22+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF039M16+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
JMSF052L24+ AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
rJMSF052L24- AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
____________________________________________________________
consensus AGGGGCAGCAAGAATTCTGGAAGTGGAAAGTCGGGAGGTTTTGAGGGGCTGGAATTTAGC
. : . : . : . : . : . :
rJMSF018E23- GCAATTTGGAG
rJMSF042P16- GCAATTTGGAGGCA
rJMSF049J03- GCAATTTGAAGGCAAAG
rJMSF018P22- GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
rJMSF031G17- GCAATTTGGAGGCAAAGA
rJMSF031A20- GCAATTTGGA
rJMSF039M16- GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF042P16+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF031A20+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMFN002F10+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF018E23+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF018P22+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF031G17+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMFF009B22+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF039M16+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
JMSF052L24+ GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
rJMSF052L24- GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
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consensus GCAATTTGGAGGCAAAGAGCTAAAAGAGAGCTTTGGTTTAGCTGAAATGGCGGAGGAATT
. : . : . : . : . : . :
rJMSF018P22- GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
rJMSF039M16- GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF042P16+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF031A20+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMFN002F10+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF018E23+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF018P22+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF031G17+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMFF009B22+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF039M16+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
JMSF052L24+ GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
rJMSF052L24- GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
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consensus GCATACGGGGAATAAACTTGCAGAGAGTGATGAAGATGAAATCGCCATTATCGCTCTGCA
. : . : . : . : . : . :
rJMSF018P22- CAAAGGTC
rJMSF039M16- CAAAGGTCTTGGGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGTAGGTTTATCCTT
JMSF042P16+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGT
JMSF031A20+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTC
JMFN002F10+ CAAAGGTCTT-GGGAA
JMSF018E23+ CAAAGGTCTT-GGGAACTCTCCT
JMSF018P22+ CAAAGGTCTT-GGGAACT
JMSF031G17+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTC
JMFF009B22+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCAC
JMSF039M16+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGTAGGTTTATCCTT
JMSF052L24+ CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGTAGGTTTATCCTT
rJMSF052L24- CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGTAGGTTTATCCTTACC
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consensus CAAAGGTCTT-GGGAACTCTCCTTCCGCTCTTCACAGTCGCCTGTAGGTTTATCCTTACC