Contig 004420:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007E07Sequence395000670 (6)ref|XP_009628907.1|8e-04PREDICTED: receptor-like serine/threonine-protein kinase ALE2 [Nicotiana toment788004420 (4)gb|KDP28271.1|3e-120hypothetical protein JCGZ_14042 [Jatropha curcas]
JMSF013K07Sequence105000670 (6)743004420 (4)ref|XP_010322358.1|7e-83PREDICTED: serine/threonine-protein kinase PBS1 isoform X3 [Solanum lycopersicu
JMSF047K14Sequence681000670 (6)ref|XP_009628907.1|2e-28PREDICTED: receptor-like serine/threonine-protein kinase ALE2 [Nicotiana toment771004420 (4)gb|KDP28271.1|6e-115hypothetical protein JCGZ_14042 [Jatropha curcas]
JMSF051P03Sequence589000670 (6)ref|XP_006349178.1|4e-05PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Solanum tub766004420 (4)gb|KDP28271.1|7e-113hypothetical protein JCGZ_14042 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF007E07+                                                           TCTGGCAAAAC
                      ____________________________________________________________
consensus                                                              TCTGGCAAAAC
 
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rJMSF007E07+          AAGCCCCTGAAGGCCGAGCAAATTATCTGTCTACCCGTGTTATGGGCACATTTGGGTATG
rJMSF047K14+                        CGAGCAAATTATCTGTCTACCCGTGTTATGGGCACATTTGGGTATG
rJMSF013K07+                                                                GGTATG
rJMSF051P03+                        CGAGCAAATTATCTGTCTACCCGTGTTATGGGCACATTNGGGTATG
                      ____________________________________________________________
consensus             AAGCCCCTGAAGGCCGAGCAAATTATCTGTCTACCCGTGTTATGGGCACATTTGGGTATG
 
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rJMSF007E07+          TAGCCCCTGAATATGCTATGACCGGGCACCTATTAGTAAAAAGTGATGTCTACAGTTACG
rJMSF047K14+          TAGCCCCTGAATATGCTATGACCGGGCACCTATTAGTAAAAAGTGATGTCTACAGTTACG
rJMSF013K07+          TAGCCCCTGAATATGCTATGACCGGGCACCTATTAGTAAAAAGTGATGTCTACAGTTACG
rJMSF051P03+          TAGCCCCTGAATATGCTATGACCGGGCACCTATTAGTAAAAAGTGATGTCTACAGTTACG
                      ____________________________________________________________
consensus             TAGCCCCTGAATATGCTATGACCGGGCACCTATTAGTAAAAAGTGATGTCTACAGTTACG
 
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rJMSF007E07+          GGGTTGTCCTCCTTGAGTTGTTGACTGGAAGGAAGCCTGTGGACATGTCACAACCATCAG
rJMSF047K14+          GGGTTGTCCTCCTTGAGTTGTTGACTGGAAGGAAGCCTGTGGACATGTCACAACCATCAG
rJMSF013K07+          GGGTTGTCCTCC-TGAGTTGTTGACTGGAAGGAAGCCTGTGGACATGTCACAACCATCAG
rJMSF051P03+          GGGTTGTCCTCCTTGAGTTGTTGACTGGAAGGAAGCCTGTGGACATGTCACAACCATCAG
                      ____________________________________________________________
consensus             GGGTTGTCCTCCTTGAGTTGTTGACTGGAAGGAAGCCTGTGGACATGTCACAACCATCAG
 
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rJMSF007E07+          GACAGGAGAATCTTGTTACTTGGGCCAGGCCAATCCTAAGAGATAAGGATCGACTGGAAG
rJMSF047K14+          GACAGGAGAATCTTGTTACTTGGGCCAGGCCAATCCTAAGAGATAAGGATCGACTGGAAG
rJMSF013K07+          GACAGGAGAATCTTGTTACTTGGGCCAGGCCAATCCTAAGAGATAAGGATCGACTGGAAG
rJMSF051P03+          GACAGGAGAATCTTGTTACTTGGGCCAGGCCAATCCTAAGAGATAAGGATCGACTGGAAG
                      ____________________________________________________________
consensus             GACAGGAGAATCTTGTTACTTGGGCCAGGCCAATCCTAAGAGATAAGGATCGACTGGAAG
 
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rJMSF007E07+          AACTTGTTGATCCACGACTTGATGGGAAGTATCCGAAGGAAGATTTTGTACGGGTTTGCA
rJMSF047K14+          AACTTGTTGATCCACGACTTGATGGGAAGTATCCGAAGGAAGATTTTGTACGGGTTTGCA
rJMSF013K07+          AACTTGTTGATCCACGACTTGATGGGAAGTATCCGAAGGAAGATTTTGTACGGGTTTGCA
rJMSF051P03+          AACTTGTTGATCCACGACTTGATGGGAAGTATCCGAAGGAAGATTTTGTACGGGTTTGCA
                      ____________________________________________________________
consensus             AACTTGTTGATCCACGACTTGATGGGAAGTATCCGAAGGAAGATTTTGTACGGGTTTGCA
 
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rJMSF007E07+          CAATTGCTGCAGCTTGTGTTGCTCCAGAAGCAAATCAACGGCCTACAATGGGGGAGGTTG
rJMSF047K14+          CAATTGCTGCAGCTTGTGTTGCTCCAGAAGCAAATCAACGGCCTACAATGGGGGAGGTTG
rJMSF013K07+          CAATTGCTGCAGCTTGTGTTGCTCCAGAAGCAAATCAACGGCCTACAATGGGGGAGGTTG
rJMSF051P03+          CAATTGCTGCAGCTTGTGTTGCTCCAGAAGCAAATCAACGGCCTACAATGGGGGAGGTTG
                      ____________________________________________________________
consensus             CAATTGCTGCAGCTTGTGTTGCTCCAGAAGCAAATCAACGGCCTACAATGGGGGAGGTTG
 
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rJMSF007E07+          TACAATCACTAAAGATGGTGCAGCGCGTAACTGAGTATCAGGATTCCACAGCAAATTCCA
rJMSF047K14+          TACAATCACTAAAGATGGTGCAGCGCGTAACTGAGTATCAGGATTCCACAGCAAATTCCA
rJMSF013K07+          TACAATCACTAAAGATGGTGCAGCGCGTAACTGAGTATCAGGATTCCACAGCAAATTCCA
rJMSF051P03+          TACAATCACTAAAGATGGTGCAGCGCGTAACTGAGTATCAGGATTCCACAGCAAATTCCA
                      ____________________________________________________________
consensus             TACAATCACTAAAGATGGTGCAGCGCGTAACTGAGTATCAGGATTCCACAGCAAATTCCA
 
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rJMSF007E07+          ACCCTCGACCCAACCTTAGGCAGTCATCCACAACCTTTGAATCCGATGGTACATCATCAA
rJMSF047K14+          ACCCTCGACCCAACCTTAGGCAGTCATCCACAACCTTTGAATCCGATGGTACATCATCAA
rJMSF013K07+          ACCCTCGACCCAACCTTAGGCAGTCATCCACAACCTTTGAATCCGATGGTACATCATCAA
rJMSF051P03+          ACCCTCGACCCAACCTTAGGCAGTCATCCACAACCTTTGAATCCGATGGTACATCATCAA
                      ____________________________________________________________
consensus             ACCCTCGACCCAACCTTAGGCAGTCATCCACAACCTTTGAATCCGATGGTACATCATCAA
 
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rJMSF007E07+          TGTTCTCTTCTGGTCCTTACTCTGGCTTGAGTGCATTTGAAATGGACATCTCTCAGACAG
rJMSF047K14+          TGTTCTCTTCTGGTCCTTACTCTGGCTTGAGTGCATTTGAAATGGACATCTCTCAGACAG
rJMSF013K07+          TGTTCTCTTCTGGTCCTTACTCTGGCTTGAGTGCATTTGAAATGGACATCTCTCAGACAG
rJMSF051P03+          TGTTCTCTTCTGGTCCTTACTCTGGCTTGAGTGCATTTGAAATGGACATCTCTCAGACAG
                      ____________________________________________________________
consensus             TGTTCTCTTCTGGTCCTTACTCTGGCTTGAGTGCATTTGAAATGGACATCTCTCAGACAG
 
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rJMSF007E07+          CCGTATTTTCCGAAGACCTACATGAAGGACGATGACCCTTCATTCTTACAATCTGAACTG
rJMSF047K14+          CCGTATTTTCCGAAGACCTACATGAAGGACGATGACCCTTCATTCTTACAATCTGAACTG
rJMSF013K07+          CCGTATTTTCCGAAGACCTACATGAAGGACGATGACCCTTCATTCTTACAATCTGAACTG
rJMSF051P03+          CCGTATTTTCCGAAGACCTACATGAAGGACGATGACCCTTCATTCTTACAATCTGAACTG
                      ____________________________________________________________
consensus             CCGTATTTTCCGAAGACCTACATGAAGGACGATGACCCTTCATTCTTACAATCTGAACTG
 
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rJMSF007E07+          CAGTAGAACTTTGCAGGGAATTTTTGTGATGTAATGGCAGATGATCTTTCTTTCCCCCTT
rJMSF047K14+          CAGTAGAACTTTGCAGGGAATTTTTGTGATGTAATGGCAGATGATCTTTCTTTCCCCCTT
rJMSF013K07+          CAGTAGAACTTTGCAGGGAATTTTTGTGATGTAATGGCAGATGATCTTTCTTTCCCCCTT
rJMSF051P03+          CAGTAGAACTTTGCAGGGAATTTTTGTGATGTAATGGCAGATGATCTTTCTTTCCCCCTT
                      ____________________________________________________________
consensus             CAGTAGAACTTTGCAGGGAATTTTTGTGATGTAATGGCAGATGATCTTTCTTTCCCCCTT
 
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rJMSF007E07+          GGGCTGGGATGGTGGGGCTATTCATCCCTTGTAGAGAACCATTGTTCAGTAAGTTTTCAA
rJMSF047K14+          GGGCTGGGATGGTGGGGCTATTCATCCCTTGTAGAGAACCATTGTTCAGTAAGTTTTCAA
rJMSF013K07+          GGGCTGGGATGGTGGGGCTATTCATCCCTTGTAGAGAACCATTGTTCAGTAAGTTTTCAA
rJMSF051P03+          GGGCTGGGATGGTGGGGCTATTCATCCCTTGTAGAGAACCATTGTTCAGTAAGTTTTCAA
                      ____________________________________________________________
consensus             GGGCTGGGATGGTGGGGCTATTCATCCCTTGTAGAGAACCATTGTTCAGTAAGTTTTCAA
 
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rJMSF007E07+          TGTGGTAACTCTCTACTGTTGGATGAGAGCTGTACATATGTTTGATACCCTCGCT     
rJMSF047K14+          TGTGGTAACTCTCTACTGTTGGATGAGAGCTGTACATATGTTTGATACCCTCGCT     
rJMSF013K07+          TGTGGTAACTCTCTACTGTTGGATGAGAGCTGTACATATGTTTGATACCCTCGCT     
rJMSF051P03+          TGTGGTAACTCTCTACTGTTGGATGAGAGCTGTACATATGTTTGATACCCTCGCTTCTTT
                      ____________________________________________________________
consensus             TGTGGTAACTCTCTACTGTTGGATGAGAGCTGTACATATGTTTGATACCCTCGCTTCTTT