Contig 004411:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003L20Sequence597001559 (2)ref|XP_009800394.1|1e-72PREDICTED: UDP-glycosyltransferase 73C3-like [Nicotiana sylvestris]717004411 (3)ref|XP_006367260.1|8e-64PREDICTED: UDP-glycosyltransferase 73C5-like [Solanum tuberosum]
JMSF014B21Sequence742004411 (3)ref|XP_009800394.1|1e-68PREDICTED: UDP-glycosyltransferase 73C3-like [Nicotiana sylvestris]
JMSF050J04Sequence687001559 (2)ref|XP_009631489.1|4e-84PREDICTED: UDP-glycosyltransferase 73C1 [Nicotiana tomentosiformis]740004411 (3)ref|XP_006367260.1|1e-62PREDICTED: UDP-glycosyltransferase 73C5-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF014B21+                               AAGCCTCTCGCGATTGCCGACTCCTCAGATGATAGAGCT
                      ____________________________________________________________
consensus                                  AAGCCTCTCGCGATTGCCGACTCCTCAGATGATAGAGCT
 
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rJMSF014B21+          CGGGCTCGCACTGGAGTCATCAAACCGCCCTTTCATTTGGGTTATCAGGCACATCTCCGA
rJMFF003L20+                                             TTTGGGTTATCAGGCACATCTCCGA
rJMSF050J04+                                                  GTTATCAGGCACATCTCCGA
                      ____________________________________________________________
consensus             CGGGCTCGCACTGGAGTCATCAAACCGCCCTTTCATTTGGGTTATCAGGCACATCTCCGA
 
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rJMSF014B21+          TGAGTTTCAAAACTGGCTTCGCCAAGAAAAATATGAGGAAAGAGTTAAAGAGCAACAAGG
rJMFF003L20+          TGAGTTTCAAAACTGGCTTCGCCAAGAAAAATATGAGGAAAGAGTTAAAGAGCAACAAGG
rJMSF050J04+          TGAGTTTCAAAACTGGCTTCGCCAAGAAAAATATGAGGAAAGAGTTAAAGAGCAACAAGG
                      ____________________________________________________________
consensus             TGAGTTTCAAAACTGGCTTCGCCAAGAAAAATATGAGGAAAGAGTTAAAGAGCAACAAGG
 
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rJMSF014B21+          GCTTATCATNTATGGTTGGGCTCCGCAAGTGCTAATCTTGTCTCACCCGTCTATCGGAGG
rJMFF003L20+          GCTTATCATCTATGGTTGGGCTCCGCAAGTGCTAATCTTGTCTCACCCGTCTATCGGAGG
rJMSF050J04+          GCTTATCATCTATGGTTGGGCTCCGCAAGTGCTAATCTTGTCTCACCCGTCTATCGGAGG
                      ____________________________________________________________
consensus             GCTTATCATCTATGGTTGGGCTCCGCAAGTGCTAATCTTGTCTCACCCGTCTATCGGAGG
 
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rJMSF014B21+          ATTCTTAACTCACTGCGGGTGGAACTCGTCCCTGGAAGCCATTACTTCCGGCTTGCCTTT
rJMFF003L20+          ATTCTTAACTCACTGCGGGTGGAACTCGTCCCTGGAAGCCATTACTTCCGGCTTGCCTTT
rJMSF050J04+          ATTCTTAACTCACTGCGGGTGGAACTCGTCCCTGGAAGCCATTACTTCCGGCTTGCCTTT
                      ____________________________________________________________
consensus             ATTCTTAACTCACTGCGGGTGGAACTCGTCCCTGGAAGCCATTACTTCCGGCTTGCCTTT
 
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rJMSF014B21+          GATCACTTGGCCACTTTTTGGGGAGCAATTCTTGAACGAGAGGCTAATTGTGAATGTACT
rJMFF003L20+          GATCACTTGGCCACTTTTTGGGGAGCAATTCTTGAACGAGAGGCTAATTGTGAATGTACT
rJMSF050J04+          GATCACTTGGCCACTTTTTGGGGAGCAATTCTTGAACGAGAGGCTAATTGTGAATGTACT
                      ____________________________________________________________
consensus             GATCACTTGGCCACTTTTTGGGGAGCAATTCTTGAACGAGAGGCTAATTGTGAATGTACT
 
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rJMSF014B21+          AAGAATCGGAGTGAAGACTGGAGTGGAGTTTCCTGTTTTGTTTGGAGCGGAAGAACAGAC
rJMFF003L20+          AAGAATCGGAGTGAAGACTGGAGTGGAGTTTCCTGTTTTGTTTGGAGCGGAAGAACAGAC
rJMSF050J04+          AAGAATCGGAGTGAAGACTGGAGTGGAGTTTCCTGTTTTGTTTGGAGCGGAAGAACAGAC
                      ____________________________________________________________
consensus             AAGAATCGGAGTGAAGACTGGAGTGGAGTTTCCTGTTTTGTTTGGAGCGGAAGAACAGAC
 
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rJMSF014B21+          AGGAGTCCAAGTGAATAGAGATGATATTGTAGTGGCCANTGAGGAAGTGATGGGTGGAGG
rJMFF003L20+          AGGAGTCCAAGTGAATAGAGATGATATTGTAGTGGCCATTGAGGAAGTGATGGGTGGAGG
rJMSF050J04+          AGGAGTCCAAGTGAATAGAGATGATATTGTAGTGGCCATTGAGGAAGTGATGGGTGGAGG
                      ____________________________________________________________
consensus             AGGAGTCCAAGTGAATAGAGATGATATTGTAGTGGCCATTGAGGAAGTGATGGGTGGAGG
 
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rJMSF014B21+          AGAGGAGGCTGAAATGAGAAGAAAAAGAATGAAAAAGCTTGGAGAAANGGCAAGGNCGGC
rJMFF003L20+          AGAGGAGGCTGAAATGAGAAGAAAAAGAATGAAAAAGCTTGGAGAAATGGCAAGGACGGC
rJMSF050J04+          AGAGGAGGCTGAAATGAGAAGAAAAAGAATGAAAAAGCTTGGAGAAATGGCAAGGACGGC
                      ____________________________________________________________
consensus             AGAGGAGGCTGAAATGAGAAGAAAAAGAATGAAAAAGCTTGGAGAAATGGCAAGGACGGC
 
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rJMSF014B21+          AATGGAGGGAGGAGGTTCATCTTTCCATAATATTGCCAAACTANTTCAGGATGTTGCAGA
rJMFF003L20+          AATGGAGGGAGGAGGTTCATCTTTCCATAATATTGCCAAACTAATTCAGGATGTTGCAGA
rJMSF050J04+          AATGGAGGGAGGAGGTTCATCTTTCCATAATATTGCCAAACTAATTCAGGATGTTGCAGA
                      ____________________________________________________________
consensus             AATGGAGGGAGGAGGTTCATCTTTCCATAATATTGCCAAACTAATTCAGGATGTTGCAGA
 
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rJMSF014B21+          GGAATC                                                      
rJMFF003L20+          GGAATCGAACGCTAGGACATCAGTTTAAGACTATCATGTTAAGGCATAAGCACCTGTTAG
rJMSF050J04+          GGAATCGAACGCTAGGACATCAGTTTAAGACTATCATGTTAAGGCATAAGCACCTGTTAG
                      ____________________________________________________________
consensus             GGAATCGAACGCTAGGACATCAGTTTAAGACTATCATGTTAAGGCATAAGCACCTGTTAG
 
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rJMFF003L20+          AGTTTTATGCAATCTTTCCTTAGCTATGGCAGGTTATTATTGTAGCTTTCCTTGTAATGC
rJMSF050J04+          AGTTTTATGCAATCTTTCCTTAGCTATGGCAGGTTATTATTGTAGCTTTCCTTGTAATGC
                      ____________________________________________________________
consensus             AGTTTTATGCAATCTTTCCTTAGCTATGGCAGGTTATTATTGTAGCTTTCCTTGTAATGC
 
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rJMFF003L20+          TCCGTTATCTTTGGTTCTGCAGTTGTACATTTGTATAGATATATTGCTCCTAGATTTTCA
rJMSF050J04+          TCCGTTATCTTTGGTTCTGCAGTTGTACATTTGTATAGATATATTGCTCCTAGATTTTCA
                      ____________________________________________________________
consensus             TCCGTTATCTTTGGTTCTGCAGTTGTACATTTGTATAGATATATTGCTCCTAGATTTTCA
 
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rJMFF003L20+          ATAAAATGTATCTCTCTTCTCTGTTTATACAC                            
rJMSF050J04+          ATAAAATGTATCTCTCTTCTCTGTTTATACACTGCATATCTTACATGGTATCAAGAGTTT
                      ____________________________________________________________
consensus             ATAAAATGTATCTCTCTTCTCTGTTTATACACTGCATATCTTACATGGTATCAAGAGTTT