Contig 004397:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF037D02+                                        GAATTTCCTGTGGTCCATGAAGCCGCCGAG
rJMSF047L02+                                    GCCTGAATTTCCTGTGGTCCATGAAGCCGCCGAG
                      ____________________________________________________________
consensus                                       GCCTGAATTTCCTGTGGTCCATGAAGCCGCCGAG
 
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rJMSF037D02+          CAACTGGGCGGCGTTCAAGCCGGCGGTGCTGCCGGAAGGGTTCCTGGAGAGAGCGGGGGA
rJMSF047L02+          CAACTGGGCGGCGTTCAAGCCGGCGGTGCTGCCGGAAGGGTTCCTGGAGAGAGCGGGGGA
                      ____________________________________________________________
consensus             CAACTGGGCGGCGTTCAAGCCGGCGGTGCTGCCGGAAGGGTTCCTGGAGAGAGCGGGGGA
 
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rJMSF037D02+          GAAAGGGAGAGTGGTGCAATGGTGCCCGCAAGAGCGCGTGTTGGCCCACCCTTCCGTCGC
rJMSF047L02+          GAAAGGGAGAGTGGTGCAATGGTGCCCGCAAGAGCGCGTGTTGGCCCACCCTTCCGTCGC
                      ____________________________________________________________
consensus             GAAAGGGAGAGTGGTGCAATGGTGCCCGCAAGAGCGCGTGTTGGCCCACCCTTCCGTCGC
 
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rJMSF037D02+          CTGTTTCGTGACCCATTGCGGGTGGAATTCCTCCATGGAAGCCCTCACCATCGGGACGCC
rJMSF047L02+          CTGTTTCGTGACCCATTGCGGGTGGAATTCCTCCATGGAAGCCCTCACCATCGGGACGCC
                      ____________________________________________________________
consensus             CTGTTTCGTGACCCATTGCGGGTGGAATTCCTCCATGGAAGCCCTCACCATCGGGACGCC
 
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rJMSF037D02+          CACCATAGCTTTCCCGCAATGGGGCGATCAAGTCACCAACGCAAAATACTCCGTCGATGT
rJMSF047L02+          CACCATAGCTTTCCCGCAATGGGGCGATCAAGTCACCAACGCAAAATACTCCGTCGATGT
                      ____________________________________________________________
consensus             CACCATAGCTTTCCCGCAATGGGGCGATCAAGTCACCAACGCAAAATACTCCGTCGATGT
 
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rJMSF037D02+          TTTCAAGACCGGACTGAGATTGTGCAGAGGTGAGGCCGAAGATAGGCTAATCCCGCGGGA
rJMSF047L02+          TTTCAAGACCGGACTGAGATTGTGCAGAGGTGAGGCCGAAGATAGGCTAATCCCGCGGGA
                      ____________________________________________________________
consensus             TTTCAAGACCGGACTGAGATTGTGCAGAGGTGAGGCCGAAGATAGGCTAATCCCGCGGGA
 
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rJMSF037D02+          AGAGATAGAGAAGTGCTTGCTGGAAGCGACGAGCGGCCCAACGGCGGCGAAGATTAGAGA
rJMSF047L02+          AGAGATAGAGAAGTGCTTGCTGGAAGCGACGAGCGGCCCAACGGCGGCGAAGATTAGAGA
                      ____________________________________________________________
consensus             AGAGATAGAGAAGTGCTTGCTGGAAGCGACGAGCGGCCCAACGGCGGCGAAGATTAGAGA
 
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rJMSF037D02+          GAATGCAGCCAAGTGGAAGAAGAAAGCGGAGGAAGCGGTGGAAGACGGCGGCTCATCCGA
rJMSF047L02+          GAATGCAGCCAAGTGGAAGAAGAAAGCGGAGGAAGCGGTGGAAGACGGCGGCTCATCCGA
                      ____________________________________________________________
consensus             GAATGCAGCCAAGTGGAAGAAGAAAGCGGAGGAAGCGGTGGAAGACGGCGGCTCATCCGA
 
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rJMSF037D02+          CCGCAACATGCAACGGTTTGTAAACGAAATTCTTCACCGTTCGAGCAACGGTAAAGTTGA
rJMSF047L02+          CCGCAACATGCAACGGTTTGTAAACGAAATTCTTCACCGTTCGAGCAACGGTAAAGTTGA
                      ____________________________________________________________
consensus             CCGCAACATGCAACGGTTTGTAAACGAAATTCTTCACCGTTCGAGCAACGGTAAAGTTGA
 
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rJMSF037D02+          AAAGCATCTTCCCAACGGCAAAGTAATTTAAGTTGCATTGTAGGATCGTCGGCAGATTAA
rJMSF047L02+          AAAGCATCTTCCCAACGGCAAAGTAATTTAAGTTGCATTGTAGGATCGTCGGCAGATTAA
                      ____________________________________________________________
consensus             AAAGCATCTTCCCAACGGCAAAGTAATTTAAGTTGCATTGTAGGATCGTCGGCAGATTAA
 
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rJMSF037D02+          TATATTATTTACAAAAATTATTTTGGTGAAAGTTCAAGTATTAATCCTTAAAATTAAATA
rJMSF047L02+          TATATTATTTACAAAAATTATTTTGGTGAAAGTTCAAGTATTAATCCTTAAAATTAAATA
                      ____________________________________________________________
consensus             TATATTATTTACAAAAATTATTTTGGTGAAAGTTCAAGTATTAATCCTTAAAATTAAATA
 
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rJMSF037D02+          AAATTCGCTACTTTTTTATACTTCTAAACTTGGAATAATCATGTAACTATTTTTTCTTAT
rJMSF047L02+          AAATTCGCTACTTTTTTATACTTCTAAACTTGGAATAATCATGTAACTATTTTTTCTTAT
                      ____________________________________________________________
consensus             AAATTCGCTACTTTTTTATACTTCTAAACTTGGAATAATCATGTAACTATTTTTTCTTAT