Contig 004388:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046E21+              TAGCTAGGCCAGCAACATGCAAGCTTGGGANCATTNCAGACCCAGGAATGTNTAGA
                      ____________________________________________________________
consensus                 TAGCTAGGCCAGCAACATGCAAGCTTGGGANCATTNCAGACCCAGGAATGTNTAGA
 
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rJMSF048H19+                               GCAAAAGGNGTTCCTGGAACCTTAGTTTTGCAGCTTGGC
rJMSF046E21+          GATGTGGNGCAATACCCCGGNGCAAAAGGNGTTCCTGGAACCTTAGTTTTGCAGCTTGGC
                      ____________________________________________________________
consensus             GATGTGGNGCAATACCCCGGNGCAAAAGGNGTTCCTGGAACCTTAGTTTTGCAGCTTGGC
 
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rJMSF048H19+          TNTCCAATTTATTTTGCTAATTGCAATTATNTTAGNGAAAGAATTTTGAGATGGATTAGG
rJMSF046E21+          TNTCCAATTTATTTTGCTAATTGCAATTNTATTAGNGAAAGAATTTTGAGATGGATTAGG
                      ____________________________________________________________
consensus             TNTCCAATTTATTTTGCTAATTGCAATTATATTAGNGAAAGAATTTTGAGATGGATTAGG
 
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rJMSF048H19+          GATGAAGATTCGGAAGGAAATGACNTCGAATATTTNTTNCTAGATTTTGGNGGTNTTACN
rJMSF046E21+          GATGAAGATTNGGAAGGAAATGACNTNGAATATTTATTACTAGATTTNGGNGGTATTACA
                      ____________________________________________________________
consensus             GATGAAGATTCGGAAGGAAATGACNTCGAATATTTATTACTAGATTTTGGNGGTATTACA
 
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rJMSF048H19+          TCNATCGATATAACCGGNGNGGNAACTTTACTCGAAATTNGAAGAAGCTTAGAAGCNATG
rJMSF046E21+          TCCATCGATNTAACNGGNGNGGAAACNTTACTCGAAATTAGAAGAAGCTTAGAAGCAATG
                      ____________________________________________________________
consensus             TCCATCGATATAACCGGNGNGGAAACTTTACTCGAAATTAGAAGAAGCTTAGAAGCAATG
 
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rJMSF048H19+          GGGNTTAAGATGATTTTGATAAATCCGAGGGTTGGGGTGATGGNGAAGTTGATAGTAACA
rJMSF046E21+          GGGNTTAAGANGATTTTGNTAAATCCGAGGGTTGGGGNGATGGNGAAGTTGATAGTAACA
                      ____________________________________________________________
consensus             GGGNTTAAGATGATTTTGATAAATCCGAGGGTTGGGGTGATGGNGAAGTTGATAGTAACA
 
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rJMSF048H19+          AAGNGCATAGACNTGATTGGAAGNGATGCNGNGTTTNTGTCAATTGAAGATGCCNTTCAT
rJMSF046E21+          AAGNGCATAGACATGATTGGAAGNGATGCNGTGTTTNTGTCAATTGAAGATGCCNTTCAT
                      ____________________________________________________________
consensus             AAGNGCATAGACATGATTGGAAGNGATGCNGTGTTTNTGTCAATTGAAGATGCCNTTCAT
 
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rJMSF048H19+          TGTTGCCNATTNTCCTTCAAAAAATNTGGNGTCCTTNCAAAAATTCAAGAACCGGAAACN
rJMSF046E21+          AGTTGCCAATTNTCCTTCAAAAAATCNGGNGTCCTTACAAAAATTCAAGAACCNGAANCN
                      ____________________________________________________________
consensus             TGTTGCCAATTNTCCTTCAAAAAATCTGGNGTCCTTACAAAAATTCAAGAACCGGAAACN
 
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rJMSF048H19+          GTNTAAGNTTTTGGAAATTNAATGCCCNAGCNATTTTTTTTTTTTT              
rJMSF046E21+          GTTTAAGATTTTGGAAATTAAATGCCCCAGCAATTTTTTTTTTTTTAANNATAAAAATAC
                      ____________________________________________________________
consensus             GTTTAAGATTTTGGAAATTAAATGCCCCAGCAATTTTTTTTTTTTTAANNATAAAAATAC
 
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rJMSF046E21+          GAAATAAAAAGGCATAAGATACTGATGAAGATCATGTTGTATTCCTGCCCAGTTGTATNC
                      ____________________________________________________________
consensus             GAAATAAAAAGGCATAAGATACTGATGAAGATCATGTTGTATTCCTGCCCAGTTGTATNC