Contig 004373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035H07Sequence184004373 (3)
JMSF032N14Sequence625000837 (2)gb|KJB51106.1|9e-85hypothetical protein B456_008G201300 [Gossypium raimondii]729004373 (3)gb|KDO70183.1|5e-04hypothetical protein CISIN_1g0380452mg, partial [Citrus sinensis]
JMSF043J03Sequence714000837 (2)ref|XP_009607879.1|207PREDICTED: uridine-cytidine kinase C isoform X2 [Nicotiana tomentosiformis]762004373 (3)gb|EYU38166.1|3e-06hypothetical protein MIMGU_mgv1a002631mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF032N14+ GAGGGGACAACG
rJMSF043J03+ ATCTGTCATGGANGAGGTTGTTGCGATTGCGAGGGGACAACG
                      ____________________________________________________________
consensus ATCTGTCATGGANGAGGTTGTTGCGATTGCGAGGGGACAACG
 
. : . : . : . : . : . :
rJMSF032N14+ ACAGATCATGCACCAGATAGACATTCTAAGCAATACCATACGTGAGACGTATGGCGAGAG
rJMSF043J03+ ACAGATCATGCACCAGATAGACATTNTAAGCAATACCATACGTGAGACGTATGGCGAGAG
                      ____________________________________________________________
consensus ACAGATCATGCACCAGATAGACATTCTAAGCAATACCATACGTGAGACGTATGGCGAGAG
 
. : . : . : . : . : . :
rJMSF032N14+ GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
rJMSF043J03+ GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
                      ____________________________________________________________
consensus GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
 
. : . : . : . : . : . :
rJMSF032N14+ TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
rJMSF043J03+ TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
                      ____________________________________________________________
consensus TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
 
. : . : . : . : . : . :
rJMSF032N14+ ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
rJMSF043J03+ ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
                      ____________________________________________________________
consensus ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
 
. : . : . : . : . : . :
rJMSF032N14+ CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
rJMSF043J03+ CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
                      ____________________________________________________________
consensus CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
 
. : . : . : . : . : . :
rJMSF032N14+ CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
rJMSF043J03+ CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
                      ____________________________________________________________
consensus CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
 
. : . : . : . : . : . :
rJMSF032N14+ ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
rJMSF043J03+ ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
                      ____________________________________________________________
consensus ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
 
. : . : . : . : . : . :
rJMSF032N14+ TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
rJMSF043J03+ TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
                      ____________________________________________________________
consensus TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
 
. : . : . : . : . : . :
JMFN035H07- AAATCATTCTTCTTCATTTTGCCTAATGAA
rJMSF032N14+ TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
rJMSF043J03+ TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
                      ____________________________________________________________
consensus TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
 
. : . : . : . : . : . :
JMFN035H07- AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
rJMSF032N14+ AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
rJMSF043J03+ AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
                      ____________________________________________________________
consensus AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
 
. : . : . : . : . : . :
JMFN035H07- ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
rJMSF032N14+ ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
rJMSF043J03+ ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
                      ____________________________________________________________
consensus ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
 
. : . : . : . : . : . :
JMFN035H07- AATATTCATTGAAGCAGTAAAGAACTCATTTTTC
rJMSF032N14+ AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACT
rJMSF043J03+ AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACTATC
                      ____________________________________________________________
consensus AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACTATC