Contig 004370:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004I04Sequence468023681142004370 (3)
JMSF039A05Sequence686003850 (6)ref|XP_006343345.1|2e-26PREDICTED: probable protein phosphatase 2C 60-like isoform X1 [Solanum tuberosu328004370 (3)
JMSF043F07Sequence809003850 (6)ref|XP_006343345.1|4e-45PREDICTED: probable protein phosphatase 2C 60-like isoform X1 [Solanum tuberosu153004370 (3)

Alignment

This contig is upended


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rJMSF039A05+                                         TTNNNTNANNGGNCCNGCNCNNTNCCNGN
                      ____________________________________________________________
consensus                                            TTNNNTNANNGGNCCNGCNCNNTNCCNGN
 
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rJMSF039A05+          GNGGNGGGGGGNTTAANGGGCCNGNGGNNAAAACCCTGGGTCCCTGNGGNTTTNNNGNAN
                      ____________________________________________________________
consensus             GNGGNGGGGGGNTTAANGGGCCNGNGGNNAAAACCCTGGGTCCCTGNGGNTTTNNNGNAN
 
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rJMSF039A05+          CCACCNGGGNTGGGGNCTNCNTGNAAAAAAACNAAAACNAAACCNTTTNCTNTNNGGGNT
                      ____________________________________________________________
consensus             CCACCNGGGNTGGGGNCTNCNTGNAAAAAAACNAAAACNAAACCNTTTNCTNTNNGGGNT
 
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rJMSF039A05+          NCNACCCCCNTTTCCGGGTCCNTTGNAACNNCCCNCCNGGNTTTGGNTTGNTTATCCAAA
rJMSF043F07+                                                   TTTGGNTTGNTTATCCAAA
                      ____________________________________________________________
consensus             NCNACCCCCNTTTCCGGGTCCNTTGNAACNNCCCNCCNGGNTTTGGNTTGNTTATCCAAA
 
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rJMSF039A05+          GNAAAAAAAAAAAACAACTAGAGAAGTCGCAGCTAATCTTAATTCTTTTGTTGTAAAATG
rJMFF004I04+            AAAAAAAAAAAACAACTAGAGAAGTCGCAGCTAATCTTAATTCTTTTGTTGTAAAATG
rJMSF043F07+          GNAAAAAAAAAAAACAACTAGAGAAGTCGCAGCTAATCTTAATTCTTTTGTTGTAAAATG
                      ____________________________________________________________
consensus             GNAAAAAAAAAAAACAACTAGAGAAGTCGCAGCTAATCTTAATTCTTTTGTTGTAAAATG
 
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rJMSF039A05+          TAATGCTTTTTTAGCTTTGGAACCGGCTTCTTCTTTAGTGTCTCATCACCCAAAAGT   
rJMFF004I04+          TAATGCTTTTTTAGCTTTGGAACCGGCGTCTTCTNTAGTGTCTCATCACCCAAAAGT   
rJMSF043F07+          TAATGCTTTTTTAGCTTTGGAACCGGCGTCTTCTTTAGTGTCTCATCACCCAAAAGTGAA
                      ____________________________________________________________
consensus             TAATGCTTTTTTAGCTTTGGAACCGGCGTCTTCTTTAGTGTCTCATCACCCAAAAGTGAA