Contig 004361:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012L11Sequence491012134 (3)ref|XP_009601294.1|2e-28PREDICTED: uncharacterized protein LOC104096614 isoform X3 [Nicotiana tomentosi740004361 (2)ref|XP_006360715.1|283PREDICTED: uncharacterized protein LOC102580131 [Solanum tuberosum]
JMSF042A14Sequence459012134 (3)ref|XP_009601294.1|8e-06PREDICTED: uncharacterized protein LOC104096614 isoform X3 [Nicotiana tomentosi654004361 (2)ref|XP_010053139.1|117PREDICTED: uncharacterized protein LOC104441662 [Eucalyptus grandis] gb|KCW77397

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012L11+ CTAAACAATCTAGTACTTCCA
                      ____________________________________________________________
consensus CTAAACAATCTAGTACTTCCA
 
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rJMSF012L11+ CAGTTAAGCAAGCTTCCTCAAAGATTTGTTGATAGTATGGCGATCAGGCAACAACTTTTA
                      ____________________________________________________________
consensus CAGTTAAGCAAGCTTCCTCAAAGATTTGTTGATAGTATGGCGATCAGGCAACAACTTTTA
 
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rJMSF012L11+ TCACAGTATGATGTGCTCCAATCTCGGATAAAGGAATTGAAAGGAACTGCTGAAAATGAG
                      ____________________________________________________________
consensus TCACAGTATGATGTGCTCCAATCTCGGATAAAGGAATTGAAAGGAACTGCTGAAAATGAG
 
. : . : . : . : . : . :
rJMSF012L11+ GTTTGGATGTTGGCTCGCATGTGCCAGTTGGAGAACAAAATTTCTGCTGTTGGAGAACCT
                      ____________________________________________________________
consensus GTTTGGATGTTGGCTCGCATGTGCCAGTTGGAGAACAAAATTTCTGCTGTTGGAGAACCT
 
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rJMSF012L11+ TCTTACAGTGCTCGGAAAAGCAGAGTGAAAAGGGTGCGCGAAAGCTTGGAAAGTTCCCTT
                      ____________________________________________________________
consensus TCTTACAGTGCTCGGAAAAGCAGAGTGAAAAGGGTGCGCGAAAGCTTGGAAAGTTCCCTT
 
. : . : . : . : . : . :
rJMSF012L11+ AAGAGGAGGATAGAATTAATTGAAAGCTATGCAAGGATATCTTCGATGATTGAAATCGAG
rJMSF042A14+ GATATCTTCGATGATTGAAATCGAG
                      ____________________________________________________________
consensus AAGAGGAGGATAGAATTAATTGAAAGCTATGCAAGGATATCTTCGATGATTGAAATCGAG
 
. : . : . : . : . : . :
rJMSF012L11+ GTAGAGTTGGATTCTGATGTTCTTGCTGCCGAAGCAGCAAGCAATGTGGAAAGTATTGCT
rJMSF042A14+ GTAGAGTTGGATTCTGATGTTCTTGCTGCCGAAGCAGCAAGCAATGTGGAAAGTATTGCT
                      ____________________________________________________________
consensus GTAGAGTTGGATTCTGATGTTCTTGCTGCCGAAGCAGCAAGCAATGTGGAAAGTATTGCT
 
. : . : . : . : . : . :
rJMSF012L11+ GATCAGATACAACAAATCATGGAGCTTGAAAAGCTTGAAGAAAAATGGAGACTCCAAGCA
rJMSF042A14+ GATCAGATACAACAAATCATGGAGCTTGAAAAGCTTGAAGAAAAATGGAGACTCCAAGCA
                      ____________________________________________________________
consensus GATCAGATACAACAAATCATGGAGCTTGAAAAGCTTGAAGAAAAATGGAGACTCCAAGCA
 
. : . : . : . : . : . :
rJMSF012L11+ GAGGCAAATGATGAGGCTGAAAGACTCCTTAGCTCTGAACCCTTGTCGGTGGAAAAGGTG
rJMSF042A14+ GAGGCAAATGATGAGGCTGAAAGACTCCTTAGCTCTGAACCCTTGTCGGTGGAAAAGGTG
                      ____________________________________________________________
consensus GAGGCAAATGATGAGGCTGAAAGACTCCTTAGCTCTGAACCCTTGTCGGTGGAAAAGGTG
 
. : . : . : . : . : . :
rJMSF012L11+ CTAGACAGATAACTGCTGTACATTCATACCCAAGGGTTGACCGACAAACTGGAGAAATGG
rJMSF042A14+ CTAGACAGATAACTGCTGTACATTCATACCCAAGGGTTGACCGACAAACTGGAGAAATGG
                      ____________________________________________________________
consensus CTAGACAGATAACTGCTGTACATTCATACCCAAGGGTTGACCGACAAACTGGAGAAATGG
 
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rJMSF012L11+ CGGCAAACTATTGAGATCCAGAGCCCTTGAAATTTCTGATGTAAGTCCAGCTCTCCAACT
rJMSF042A14+ CGGCAAACTATTGAGATCCAGAGCCCTTGAAATTTCTGATGTAAGTCCAGCTCTCCAACT
                      ____________________________________________________________
consensus CGGCAAACTATTGAGATCCAGAGCCCTTGAAATTTCTGATGTAAGTCCAGCTCTCCAACT
 
. : . : . : . : . : . :
rJMSF012L11+ GCATACGATACGCCATTCATTTCCTGAAGATTAAATGTTAAAACATGGAAATCTTTGTTC
rJMSF042A14+ GCATACGATACGCCATTCATTTCCTGAAGATTAAATGTTAAAACATGGAAATCTTTGTTC
                      ____________________________________________________________
consensus GCATACGATACGCCATTCATTTCCTGAAGATTAAATGTTAAAACATGGAAATCTTTGTTC
 
. : . : . : . : . : . :
rJMSF012L11+ GAGGAGATAGGTGTTTGTTTGTTCATACATGTTTTTATTTTGTAACGAATGAATCTAAA
rJMSF042A14+ GAGGAGATAGGTGTTTGTTTGTTCATACATGTTTTTATTTTGTAACGAATGAATCTAAAG
                      ____________________________________________________________
consensus GAGGAGATAGGTGTTTGTTTGTTCATACATGTTTTTATTTTGTAACGAATGAATCTAAAG