Contig 004344:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039L10Sequence677004344 (3)ref|XP_009623779.1|2e-83PREDICTED: vesicle transport protein GOT1B-like isoform X4 [Nicotiana tomentosi829004344 (3)ref|XP_009623779.1|1e-82PREDICTED: vesicle transport protein GOT1B-like isoform X4 [Nicotiana tomentosi
JMSF051J09Sequence630010940 (2)emb|CDP16781.1|6e-18unnamed protein product [Coffea canephora]718004344 (3)ref|XP_009791362.1|2e-18PREDICTED: probable acyl-activating enzyme 18, peroxisomal isoform X2 [Nicotian

Alignment

This contig is upended


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rJMSF051J09+                            GAGCTGAAGACAAAATTTTCNAGAGCCATACAGAGCAACCTT
                      ____________________________________________________________
consensus                               GAGCTGAAGACAAAATTTTCNAGAGCCATACAGAGCAACCTT
 
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rJMSF051J09+          AATCCTTTATTCAAGGTGAGTGCTGTAAAAATTGTTCCATCATTTNCACGAACAGCTTCA
                      ____________________________________________________________
consensus             AATCCTTTATTCAAGGTGAGTGCTGTAAAAATTGTTCCATCATTTNCACGAACAGCTTCA
 
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rJMSF051J09+          AATAAGGTACTGAGGAGACTTTTAAGGGATAAATGGAAGCAGGAGCTTNTGACACAGAGT
                      ____________________________________________________________
consensus             AATAAGGTACTGAGGAGACTTTTAAGGGATAAATGGAAGCAGGAGCTTNTGACACAGAGT
 
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rJMSF051J09+          AAACTTTAACTCACTATCTGGATGATGCAAGAGACATGGAGGCCAAAGTGCAGCAGCTTC
                      ____________________________________________________________
consensus             AAACTTTAACTCACTATCTGGATGATGCAAGAGACATGGAGGCCAAAGTGCAGCAGCTTC
 
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rJMSF051J09+          ATCTTCAGAAACATAGAAGAGACTGAGATAATCTTTCCACTCAAAAGCCTTCTCTTCATG
                      ____________________________________________________________
consensus             ATCTTCAGAAACATAGAAGAGACTGAGATAATCTTTCCACTCAAAAGCCTTCTCTTCATG
 
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rJMSF051J09+          GGGAGTAAAGCTTGTTCCAAACCGGACACAATTCGAGGCAGAGTACTCCTTCAGAGAAGG
rJMSF039L10-                                                             CAGAGAAGG
                      ____________________________________________________________
consensus             GGGAGTAAAGCTTGTTCCAAACCGGACACAATTCGAGGCAGAGTACTCCTTCAGAGAAGG
 
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rJMSF051J09+          ATTACAAGTCAATCAAAAAATGGCTTATAGCAGGCTATGAATCTAAAGGTGAACTGCAGC
rJMSF039L10-          ATTACAAGTCAATCAAAAAATGGCTTATAGCAGGCTATGAATCTAAAGGTGAACTGCAGC
                      ____________________________________________________________
consensus             ATTACAAGTCAATCAAAAAATGGCTTATAGCAGGCTATGAATCTAAAGGTGAACTGCAGC
 
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rJMSF051J09+          AAGGCACTAAAATAGCCCGTGTGCCTATATTATCATCTAACAAGGCTATTACTGTCATCA
rJMSF039L10-          AAGGCACTAAAATAGCCCGTGTGCCTATATTATCATCTAACAAGGCTATTACTGTCATCA
                      ____________________________________________________________
consensus             AAGGCACTAAAATAGCCCGTGTGCCTATATTATCATCTAACAAGGCTATTACTGTCATCA
 
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rJMSF051J09+          ATCATCATTCTGTGGAGTGGAACACTTCAACACTGTATTTCGCAATCCTTAGTCCTTACA
rJMSF039L10-          ATCATCATTCTGTGGAGTGGAACACTTCAACACTGTATTTCGCAATCCTTAGTCCTTACA
                      ____________________________________________________________
consensus             ATCATCATTCTGTGGAGTGGAACACTTCAACACTGTATTTCGCAATCCTTAGTCCTTACA
 
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rJMSF051J09+          GTTAACCAAACACTTTGAGGCTGTATTTCACAAATCCTTATTGAAGTTATTATACTGGTA
JMSF039L10+                                                           ATTATACTGGTA
rJMSF039L10-          GTTAACCAAACACTTTGAGGCTGTATTTCACAAATCCTTATTGAAGTTATTATACTGGTA
                      ____________________________________________________________
consensus             GTTAACCAAACACTTTGAGGCTGTATTTCACAAATCCTTATTGAAGTTATTATACTGGTA
 
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rJMSF051J09+          CTCGCTTTCCCCGGTAACGATCAAAGAAC                               
JMSF039L10+           CTCGCTTTCCCCGGTAACGATCAAAGAACGATCTGACAAAAGGCTGCTGAAAGAGCCAAC
rJMSF039L10-          CTCGCTTTCCCCGGTAACGATCAAAGAACGATCTGACAAAAGGCTGCTGAAAGAGCCAAC
                      ____________________________________________________________
consensus             CTCGCTTTCCCCGGTAACGATCAAAGAACGATCTGACAAAAGGCTGCTGAAAGAGCCAAC
 
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JMSF039L10+           CAACAATAGGAATCTTTTGCAGGAAAACTGCCAATGTTGGCCAGAACCCACTGAAAAGTA
rJMSF039L10-          CAACAATAGGAATCTTTTGCAGGAAAACTGCCAATGTTGGCCAGAACCCACTGAAAAGTA
                      ____________________________________________________________
consensus             CAACAATAGGAATCTTTTGCAGGAAAACTGCCAATGTTGGCCAGAACCCACTGAAAAGTA
 
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JMSF039L10+           CAACAAAGCCATAAGCCTCAAGAATCATCCCTATTATAGGCCATCCAATGACAACCAAGA
rJMSF039L10-          CAACAAAGCCATAAGCCTCAAGAATCATCCCTATTATAGGCCATCCAATGACAACCAAGA
                      ____________________________________________________________
consensus             CAACAAAGCCATAAGCCTCAAGAATCATCCCTATTATAGGCCATCCAATGACAACCAAGA
 
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JMSF039L10+           AAAAGCCAGCACCAAACGACATTGTTCCCTTATAGTTGCTACGTTTCATGAAGAACTGCA
rJMSF039L10-          AAAAGCCAGCACCAAACGACATTGTTCCCTTATAGTTGCTACGTTTCATGAAGAACTGCA
                      ____________________________________________________________
consensus             AAAAGCCAGCACCAAACGACATTGTTCCCTTATAGTTGCTACGTTTCATGAAGAACTGCA
 
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JMSF039L10+           TGGATGGCTTCAGACCAATAGTTAAGGCAACCCCTGATACGAAGAGGATATTTCCCATGG
rJMSF039L10-          TGGATGGCTTCAGACCAATAGTTAAGGCAACCCCTGATACGAAGAGGATATTTCCCATGG
                      ____________________________________________________________
consensus             TGGATGGCTTCAGACCAATAGTTAAGGCAACCCCTGATACGAAGAGGATATTTCCCATGG
 
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JMSF039L10+           CAATTAGCCCTTTGTCAAAGAAGAAAATGATTCCAATGAATGAAAATAACACTCCGAATC
rJMSF039L10-          CAATTAGCCCTTTGTCAAAGAAGAAAATGATTCCAATGAATGAAAATAACACTCCGAATC
                      ____________________________________________________________
consensus             CAATTAGCCCTTTGTCAAAGAAGAAAATGATTCCAATGAATGAAAATAACACTCCGAATC
 
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JMSF039L10+           CTGTCAAGCCTAACCCAATCTTTTTACGATCGTTCATCTCAAACGAAACCATTTTCGCGG
rJMSF039L10-          CTGTCAAGCCTAACCCAATCTTTTTACGATCGTTCATCTCAAACGAAACCATTTTCGCGG
                      ____________________________________________________________
consensus             CTGTCAAGCCTAACCCAATCTTTTTACGATCGTTCATCTCAAACGAAACCATTTTCGCGG
 
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JMSF039L10+           ATTCAGAT                                                    
rJMSF039L10-          ATTCAGATTACCGTCAAACCGTAGACAAAACCTGCTATGCTGCTGTAGTGGTGGCGGAGC
                      ____________________________________________________________
consensus             ATTCAGATTACCGTCAAACCGTAGACAAAACCTGCTATGCTGCTGTAGTGGTGGCGGAGC
 
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rJMSF039L10-          TTATTGGCGAGGCTCGGAGTGGGGATTTTTATGGTTGTTATGGCGGATTACGGGATTTCC
                      ____________________________________________________________
consensus             TTATTGGCGAGGCTCGGAGTGGGGATTTTTATGGTTGTTATGGCGGATTACGGGATTTCC