Contig 004330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019C20Sequence459000716 (2)gb|KCW73752.1|4e-11hypothetical protein EUGRSUZ_E023601, partial [Eucalyptus grandis] gb|KCW73753.1856004330 (2)ref|XP_006355597.1|2e-93PREDICTED: C-terminal processing peptidase, chloroplastic-like [Solanum tuberos
JMSF037M24Sequence638000716 (2)ref|XP_002271932.1|3e-37PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic [Vitis vinif593004330 (2)ref|XP_010316906.1|2e-40PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [

Alignment

This contig is upended


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rJMSF019C20+ TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
                      ____________________________________________________________
consensus TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
 
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rJMSF019C20+ ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
                      ____________________________________________________________
consensus ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
 
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rJMSF019C20+ GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
                      ____________________________________________________________
consensus GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
 
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rJMSF019C20+ ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
                      ____________________________________________________________
consensus ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
 
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rJMSF019C20+ ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
                      ____________________________________________________________
consensus ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
 
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rJMSF019C20+ ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
rJMSF037M24+ TTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
                      ____________________________________________________________
consensus ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
 
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rJMSF019C20+ CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
rJMSF037M24+ CTGATTCAATCTGTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
                      ____________________________________________________________
consensus CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
 
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rJMSF019C20+ TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
rJMSF037M24+ TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
                      ____________________________________________________________
consensus TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
 
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rJMSF019C20+ CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
rJMSF037M24+ CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
                      ____________________________________________________________
consensus CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
 
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rJMSF019C20+ TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
rJMSF037M24+ TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
                      ____________________________________________________________
consensus TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
 
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rJMSF019C20+ CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
rJMSF037M24+ CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
                      ____________________________________________________________
consensus CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
 
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rJMSF019C20+ ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
rJMSF037M24+ ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
                      ____________________________________________________________
consensus ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
 
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rJMSF019C20+ AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
rJMSF037M24+ AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
                      ____________________________________________________________
consensus AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
 
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rJMSF019C20+ GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
rJMSF037M24+ GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
                      ____________________________________________________________
consensus GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
 
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rJMSF019C20+ ATATTGATGTCCATACAGAATCAGA
rJMSF037M24+ ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC
                      ____________________________________________________________
consensus ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC