Contig 004309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019M02Sequence257012061 (3)gb|EPS60166.1|4e-15hypothetical protein M569_14639, partial [Genlisea aurea]736004309 (2)ref|XP_006349667.1|2e-94PREDICTED: mitochondrial Rho GTPase 1-like [Solanum tuberosum]
JMSF033B13Sequence679012061 (3)ref|XP_004247162.1|1e-98PREDICTED: mitochondrial Rho GTPase 1 [Solanum lycopersicum]727004309 (2)ref|XP_006349667.1|5e-88PREDICTED: mitochondrial Rho GTPase 1-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019M02+ TGAAGTCATTTTTGGGAAGGCCCTTCACTGA
rJMSF033B13+ TCACTGA
                      ____________________________________________________________
consensus TGAAGTCATTTTTGGGAAGGCCCTTCACTGA
 
. : . : . : . : . : . :
rJMSF019M02+ TGATTATGTACCTACGAGTGAAGAGCGGTATGTTGTCAACGCTGTTGACTGTCCTGGGGG
rJMSF033B13+ TGATTATGTACCTGCGAGTGAAGAGCGGTATGTTGTCAATGCTGTTGACTGTCCTGGGGG
                      ____________________________________________________________
consensus TGATTATGTACCTGCGAGTGAAGAGCGGTATGTTGTCAATGCTGTTGACTGTCCTGGGGG
 
. : . : . : . : . : . :
rJMSF019M02+ TATTAAGAAAACGCTTGTCCTTCGGGAGATTCCAGAAGATGGAATCAAAAAATTATTATC
rJMSF033B13+ TATTAAGAAAACGCTTGTCCTTCGGGAGATTCCAGAAGATGGAATAAAAAAATTATTATA
                      ____________________________________________________________
consensus TATTAAGAAAACGCTTGTCCTTCGGGAGATTCCAGAAGATGGAATCAAAAAATTATTATC
 
. : . : . : . : . : . :
rJMSF019M02+ TACTAAGGAGTCTTTGGCAAGTTGTGACATAGCAGTGTTTGTATATGACAGCTCAGATGA
rJMSF033B13+ TACTAAGGAGTCTTTGGCAAGTTGTGACATAGCAGTGTTTGTATATGACAGCTCAGATGA
                      ____________________________________________________________
consensus TACTAAGGAGTCTTTGGCAAGTTGTGACATAGCAGTGTTTGTATATGACAGCTCAGATGA
 
. : . : . : . : . : . :
rJMSF019M02+ ATATTCTCTAAAAAGAACTTCAGAATTGCTAATGGACGTAGCAAGGCAAGGGGAAGTTAC
rJMSF033B13+ ATATTCTCTAAAAAGAAATTCAGAATTGCTCATGGATGTAGCAAGGCAAGGGGAAGTTAC
                      ____________________________________________________________
consensus ATATTCTCTAAAAAGAACTTCAGAATTGCTCATGGATGTAGCAAGGCAAGGGGAAGTTAC
 
. : . : . : . : . : . :
rJMSF019M02+ TGGTTTAAGTGTGCCTTGTCTGTTTATTGCTGCAAAGGATGATTTAGATACATATCCAAT
rJMSF033B13+ CGGTTTAAGTGTGCCGTGTCTGTTTATTGCTGCTAAGGATGATTTAGATTCATATCCGAT
                      ____________________________________________________________
consensus TGGTTTAAGTGTGCCTTGTCTGTTTATTGCTGCTAAGGATGATTTAGATTCATATCCGAT
 
. : . : . : . : . : . :
rJMSF019M02+ GGCAATAAAAGATTCTACAAAGATATTCCAGTATTTTGGGATTGATTCACCTATTCACAT
rJMSF033B13+ GGCAATAAAAGATTCTACAAAGATATGCCAGTATTTTGGGATTGATTCACCTATTCACAT
                      ____________________________________________________________
consensus GGCAATAAAAGATTCTACAAAGATATTCCAGTATTTTGGGATTGATTCACCTATTCACAT
 
. : . : . : . : . : . :
rJMSF019M02+ TAGTGTGAAGGAGAGGGATCTGAACAGTGTGTTCAGTCGAATTGTGAATGCCGCCGAACA
rJMSF033B13+ TAGTGTGAAGGAGAGGGATCTGAACAGTGTGTTCAGTCGAATTGTGAATGCAGCCGAACA
                      ____________________________________________________________
consensus TAGTGTGAAGGAGAGGGATCTGAACAGTGTGTTCAGTCGAATTGTGAATGCCGCCGAACA
 
. : . : . : . : . : . :
rJMSF019M02+ CCCTCATTTGAGCGTCCCCGAAACTGAAGTTGGTCGCAACCAGAAGCGGTATCGCCAGCT
rJMSF033B13+ CCCTCATTTGAGCGTCCCCGAAACTGAAGTTGGTCGCAAGCAGAAGCGGTATCACCAGCT
                      ____________________________________________________________
consensus CCCTCATTTGAGCGTCCCCGAAACTGAAGTTGGTCGCAAGCAGAAGCGGTATCGCCAGCT
 
. : . : . : . : . : . :
rJMSF019M02+ TATCAATCGCTCTCTGATGGTCGCCTCAGTTGCGGCTGCTATAGGTGTAGTTGGAATGGC
rJMSF033B13+ TATTAATCGCTCTCTGATGGTTGCCTCAGTTGCGGCTGCTATAGGTATAGTTGGAATGGC
                      ____________________________________________________________
consensus TATTAATCGCTCTCTGATGGTTGCCTCAGTTGCGGCTGCTATAGGTGTAGTTGGAATGGC
 
. : . : . : . : . : . :
rJMSF019M02+ CGCATATCGCTCTTACATTGCAAGAAAGAACACCTCCGGTTAGG
rJMSF033B13+ CACATATCGCTCTTACATTGCAAGGAAGAACACCTCCGGTTAGGGTTAAATTTCATTGAG
                      ____________________________________________________________
consensus CGCATATCGCTCTTACATTGCAAGGAAGAACACCTCCGGTTAGGGTTAAATTTCATTGAG
 
. : . : . : . : . : . :
rJMSF033B13+ ATTGCATCTTTTGGAAGCTGGGCCTAGCTGGTTGCCCAGACGTGGCGGTAACATCCATTT
                      ____________________________________________________________
consensus ATTGCATCTTTTGGAAGCTGGGCCTAGCTGGTTGCCCAGACGTGGCGGTAACATCCATTT
 
. : . : . : . : . : . :
rJMSF033B13+ TGTTTCGGGTTTTATTTTTGCTTCCGCATTTGAACTCTATTTTAAAGTAAATAAATGACT
                      ____________________________________________________________
consensus TGTTTCGGGTTTTATTTTTGCTTCCGCATTTGAACTCTATTTTAAAGTAAATAAATGACT