Contig 004298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031C04Sequence679004298 (2)emb|CAB88214.1|4e-84putative tropinone reductase [Solanum tuberosum]715004298 (2)ref|XP_006493568.1|6e-81PREDICTED: tropinone reductase homolog isoform X1 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031C04- GGTTATAGTACCACTAAT
                      ____________________________________________________________
consensus GGTTATAGTACCACTAAT
 
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JMSF031C04- TCCTTTATTAGTTTAGACAATTTTATACTTTAGCTTCAACTATGGTATCTTGGTGTTTTA
                      ____________________________________________________________
consensus TCCTTTATTAGTTTAGACAATTTTATACTTTAGCTTCAACTATGGTATCTTGGTGTTTTA
 
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JMSF031C04- ATGGCATGACTGCCCTTGTTACTGGTGGTGCTCGAGGTATAGGACTTGCCATAGTCGAAG
                      ____________________________________________________________
consensus ATGGCATGACTGCCCTTGTTACTGGTGGTGCTCGAGGTATAGGACTTGCCATAGTCGAAG
 
. : . : . : . : . : . :
JMSF031C04- AACTTGCAAGTTCTGGAGCATATGTTTATACATGTGCACTAGAACCAGAAGAGTTGGACG
                      ____________________________________________________________
consensus AACTTGCAAGTTCTGGAGCATATGTTTATACATGTGCACTAGAACCAGAAGAGTTGGACG
 
. : . : . : . : . : . :
JMSF031C04- GGTGTTTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
rJMSF031C04+ TTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
                      ____________________________________________________________
consensus GGTGTTTGCATAAGTGGAATGACAAAGGATATAAGGTATCGGGATTGGTCTGTGACTTAA
 
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JMSF031C04- CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
rJMSF031C04+ CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
                      ____________________________________________________________
consensus CAATACGAGAAGAGCGTGAAAAGCTTATGAAGATCATTAGTAATCACTTCAATGGGAAGC
 
. : . : . : . : . : . :
JMSF031C04- TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
rJMSF031C04+ TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
                      ____________________________________________________________
consensus TAAACATCCTAATAAATAATGCAGGTGTGGCAATAATGAAAAAAATGGAAGATGTTACTG
 
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JMSF031C04- AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
rJMSF031C04+ AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
                      ____________________________________________________________
consensus AGAAAGATTGGTCAATTCAAATTGGCACCAATGTTGAAGCTGCTTTCCACATATCTCAAA
 
. : . : . : . : . : . :
JMSF031C04- TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
rJMSF031C04+ TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
                      ____________________________________________________________
consensus TGGCATACCCTTTACTAAAAGCCTCTGGAAATGGAAGCTTAGTGTTTACTTCTTCTGCTT
 
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JMSF031C04- CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
rJMSF031C04+ CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
                      ____________________________________________________________
consensus CTGGGCTTGTTGCAGTACCTGATGGTTCTATCTATACACTCAGTAAAGGAGCAATAAATC
 
. : . : . : . : . : . :
JMSF031C04- AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
rJMSF031C04+ AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
                      ____________________________________________________________
consensus AATTGACCAGAAATTTAGCATGCGAGTGGGCAAAAGATAACATTCGTGTCAATGCAGTCG
 
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JMSF031C04- CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCANTAACGTTGA
rJMSF031C04+ CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCAATAACGTTGA
                      ____________________________________________________________
consensus CACCATCGCTTATCAAAACGCCTCTTATTGATTCAGTCATTCAACATTCAATAACGTTGA
 
. : . : . : . : . : . :
JMSF031C04- A
rJMSF031C04+ AAGAAGGAGTTAATGGTCTAATCAATCGTTCAGCATTACGTCGTCCTGGTGAGCCTACTG
                      ____________________________________________________________
consensus AAGAAGGAGTTAATGGTCTAATCAATCGTTCAGCATTACGTCGTCCTGGTGAGCCTACTG
 
. : . : . : . : . : . :
rJMSF031C04+ AAGTTTCTGGGCCAGTGGCATTTCTTTGCTCTTCAGCAGCTTCATTTATTACCGGTCACA
                      ____________________________________________________________
consensus AAGTTTCTGGGCCAGTGGCATTTCTTTGCTCTTCAGCAGCTTCATTTATTACCGGTCACA
 
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rJMSF031C04+ TACTAATGGTAGATGGCGGTGCTACCATTAATGGTTATCCTTAATTAATTGGCAAGGCTC
                      ____________________________________________________________
consensus TACTAATGGTAGATGGCGGTGCTACCATTAATGGTTATCCTTAATTAATTGGCAAGGCTC
 
. : . : . : . : . : . :
rJMSF031C04+ TATTAAGTATTATAAAGTTGATACTCAGTGTTTTTTATTTTAAAAATTCAAGTGCGTGGA
                      ____________________________________________________________
consensus TATTAAGTATTATAAAGTTGATACTCAGTGTTTTTTATTTTAAAAATTCAAGTGCGTGGA