Contig 004279:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF009K07+                                                 CCCCATAAGAATTGCAGATCA
rJMSF027D09+                                ATCCACACATGCATACACCCCATAAGAATTGCAGATCA
                      ____________________________________________________________
consensus                                   ATCCACACATGCATACACCCCATAAGAATTGCAGATCA
 
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rJMFF009K07+          GATAGCTAATTTTAGGTAAAATGCAGACCGTAAGTAGTTCAGTGAAAGAAGAATTTNTGA
rJMSF027D09+          GATAGCTAATTTTAGGTAAAATGCAGACCGTAAGTAGTTCAGTGAAAGAAGAATTTCTGA
                      ____________________________________________________________
consensus             GATAGCTAATTTTAGGTAAAATGCAGACCGTAAGTAGTTCAGTGAAAGAAGAATTTCTGA
 
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rJMFF009K07+          AGAAATGGATAAAGGGTCTCCAAAAGTACGACGCCTGCAAGAGTGAAATGAGCATAACAG
rJMSF027D09+          AGAAATGGATAAAGGGTCTCCAAAAGTACGACGCCTGCAAGAGTGAAATGAGCATAACAG
                      ____________________________________________________________
consensus             AGAAATGGATAAAGGGTCTCCAAAAGTACGACGCCTGCAAGAGTGAAATGAGCATAACAG
 
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rJMFF009K07+          AGAGGAAGAACGCCATAAAGCTATCAGCGAACGTAGCCATGGCCTCCACCACTACCAGCA
rJMSF027D09+          AGAGGAAGAACGCCATAAAGCTATCAGCGAACGTAGCCATGGCCTCCACCACTACCAGCN
                      ____________________________________________________________
consensus             AGAGGAAGAACGCCATAAAGCTATCAGCGAACGTAGCCATGGCCTCCACCACTACCAGCA
 
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rJMFF009K07+          CCAGACAGTGGCCGCGAGCGATTTGGCGACGCTCAGTAATGGCGGCTGTGAAATNTGGGG
rJMSF027D09+          CCAGACAGTGGCCGCGAGCGATTTGGCGACGCTCAGTAATGGCGGCTGTGAAATNTGGGG
                      ____________________________________________________________
consensus             CCAGACAGTGGCCGCGAGCGATTTGGCGACGCTCAGTAATGGCGGCTGTGAAATNTGGGG
 
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rJMFF009K07+          CCGGGGAGATGAAGAAAATCCGGCGCCGGAGATGTTTGATGAAGCGCATTNGTCGTCGTC
rJMSF027D09+          CCGGGGAGATGAAGAAAATCCGGCGCCGGAGATGTTTGATGAAGCGCNTTNGTNGTCGTC
                      ____________________________________________________________
consensus             CCGGGGAGATGAAGAAAATCCGGCGCCGGAGATGTTTGATGAAGCGCATTNGTCGTCGTC
 
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rJMFF009K07+          GTCCAATGGCCGGAAAGCGTGCGGCTTCAAAGTATAAAGCGGCGGCGAGAGTGGTGAAGA
rJMSF027D09+          GTCCAATGGCCGGAAAGCGTGCGGCTTCAAAGTATAAAGCGGCGGCGAGAGTGGTGAAGA
                      ____________________________________________________________
consensus             GTCCAATGGCCGGAAAGCGTGCGGCTTCAAAGTATAAAGCGGCGGCGAGAGTGGTGAAGA
 
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rJMFF009K07+          AGAGAAGCGCAGTTTTGAAAGGACTTATTCCGGGAGGAGAATGCATGGAAGATGATAACN
rJMSF027D09+          AGAGAAGCGCAGTTNTGAAAGGACTTATTCCGGGAGGAGAATGCATGGAAGATGATAACN
                      ____________________________________________________________
consensus             AGAGAAGCGCAGTTTTGAAAGGACTTATTCCGGGAGGAGAATGCATGGAAGATGATAACN
 
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rJMFF009K07+          CTTTGATCAAAGAAACCCTAGATTACATACTCGCCCTGCGACTTCAAGTTGACGTCATGC
rJMSF027D09+          CTTTGATCAAAGAAACCCTAGATTACATACTCGCCCTGNGACTTCAAGTTGACGTCATGC
                      ____________________________________________________________
consensus             CTTTGATCAAAGAAACCCTAGATTACATACTCGCCCTGCGACTTCAAGTTGACGTCATGC
 
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rJMFF009K07+          GCCNCCTTGCCTCCTNTACTACCTCCTCCTAGTACCTACGTTCGTTGTTGTTACTCACAT
rJMSF027D09+          GCCNCCTTGCCTCCTNTACTACCTCCTCCTAGTACCTACGTTCGTTGTTGTTACTCACAT
                      ____________________________________________________________
consensus             GCCNCCTTGCCTCCTNTACTACCTCCTCCTAGTACCTACGTTCGTTGTTGTTACTCACAT
 
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rJMFF009K07+          AATGTTTTTCTTAAATTTTTTTTTTT                                  
rJMSF027D09+          AATGTTTTTNTTAAATTTTTTTTTTTTCTTAATTTCTTTCCATGTTCAGTTCAGTTCTTC
                      ____________________________________________________________
consensus             AATGTTTTTCTTAAATTTTTTTTTTTTCTTAATTTCTTTCCATGTTCAGTTCAGTTCTTC
 
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rJMSF027D09+          CTTAATCCAATTCTGGACAGGTATGATATATATGATGCTACTCCATATATAGATCCATTA
                      ____________________________________________________________
consensus             CTTAATCCAATTCTGGACAGGTATGATATATATGATGCTACTCCATATATAGATCCATTA